RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 ITIH4Q14624 930 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 TPSAB1Q15661 275 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 SEPT7Q16181 437 aaKnown RBP10.91□□□□□ -0.66
COL4A6-205ENST00000468338 RPE65Q16518 533 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 CCDC38Q502W7 563 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 PHF19Q5T6S3 580 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 CAPRIN2Q6IMN6 1127 aaKnown RBP10.91□□□□□ -0.66
COL4A6-205ENST00000468338 PPP1R21Q6ZMI0 780 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 ZNF534Q76KX8 674 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 NLRP9Q7RTR0 991 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 SPACA3Q8IXA5 215 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 COG1Q8WTW3 980 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 HNRNPLLQ8WVV9 542 aaKnown RBP10.91□□□□□ -0.66
COL4A6-205ENST00000468338 ZFPM2Q8WW38 1151 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 DCUN1D1Q96GG9 259 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 CCDC74BQ96LY2 380 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 OSBPL9Q96SU4 736 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 DPH1Q9BZG8 443 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 RAB33BQ9H082 229 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 TRMT1Q9NXH9 659 aaKnown RBP10.91□□□□□ -0.66
COL4A6-205ENST00000468338 EPHA6Q9UF33 1036 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 SLC2A6Q9UGQ3 507 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 SNX12Q9UMY4 172 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 TCAF1Q9Y4C2 921 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 PCDHGA3Q9Y5H0 932 aa10.91□□□□□ -0.66
COL4A6-205ENST00000468338 SDK2Q58EX2 2172 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 USP27XA6NNY8 438 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 B4E171 279 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 C9orf172C9J069 976 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.9□□□□□ -0.66
COL4A6-205ENST00000468338 AP3B1O00203 1094 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 KIF5CO60282 957 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 AP2A2O94973 939 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 GAS8O95995 478 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 GSTM1P09488 218 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 ANKRD34CP0C6C1 535 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 JMJD7P0C870 316 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 FGF3P11487 239 aaPredicted RBP10.9□□□□□ -0.66
COL4A6-205ENST00000468338 CCL4P13236 92 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 SLC5A2P31639 672 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 COILP38432 576 aaPredicted RBP10.9□□□□□ -0.66
COL4A6-205ENST00000468338 TSPAN7P41732 249 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 HALP42357 657 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 LMAN1P49257 510 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 GSTM4Q03013 218 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 GPR18Q14330 331 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 KCNJ11Q14654 390 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 DBN1Q16643 649 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 COL28A1Q2UY09 1125 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.9□□□□□ -0.66
COL4A6-205ENST00000468338 ZRANB3Q5FWF4 1079 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 ARSJQ5FYB0 599 aaPredicted RBP10.9□□□□□ -0.66
COL4A6-205ENST00000468338 PCID2Q5JVF3 399 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 ARMC3Q5W041 872 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 LRRC8BQ6P9F7 803 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 FOXR1Q6PIV2 292 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 C19orf48Q6RUI8 117 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 PACS1Q6VY07 963 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 LRRC69Q6ZNQ3 347 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 DET1Q7L5Y6 550 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 GSTA5Q7RTV2 222 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 LINC00528Q8N1L1 170 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 LILRA3Q8N6C8 439 aaPredicted RBP10.9□□□□□ -0.66
COL4A6-205ENST00000468338 BMPERQ8N8U9 685 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 AGBL5Q8NDL9 886 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 RCBTB1Q8NDN9 531 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 HM13Q8TCT9 377 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 NAT14Q8WUY8 206 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 NCSTNQ92542 709 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 HDAC10Q969S8 669 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 MAGOHBQ96A72 148 aaKnown RBP10.9□□□□□ -0.66
COL4A6-205ENST00000468338 CXorf40BQ96DE9 158 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 AHCYL2Q96HN2 611 aaKnown RBP10.9□□□□□ -0.66
COL4A6-205ENST00000468338 HSH2DQ96JZ2 352 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 NAP1L3Q99457 506 aaPredicted RBP10.9□□□□□ -0.66
COL4A6-205ENST00000468338 TREX1Q9NSU2 369 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 SEMA5BQ9P283 1151 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 PISDQ9UG56 409 aa10.9□□□□□ -0.66
COL4A6-205ENST00000468338 CACNA1GO43497 2377 aa10.89□□□□□ -0.67
COL4A6-205ENST00000468338 TCRBV7S3A2A0A539 114 aa10.89□□□□□ -0.67
COL4A6-205ENST00000468338 OR51F1A6NGY5 319 aa10.89□□□□□ -0.67
COL4A6-205ENST00000468338 PGRMC1O00264 195 aaKnown RBP10.89□□□□□ -0.67
COL4A6-205ENST00000468338 TOX3O15405 576 aaPredicted RBP10.89□□□□□ -0.67
COL4A6-205ENST00000468338 CAPN5O15484 640 aaPredicted RBP10.89□□□□□ -0.67
COL4A6-205ENST00000468338 TNFRSF21O75509 655 aa10.89□□□□□ -0.67
COL4A6-205ENST00000468338 UBXN7O94888 489 aa10.89□□□□□ -0.67
COL4A6-205ENST00000468338 GOT2P00505 430 aaKnown RBP10.89□□□□□ -0.67
COL4A6-205ENST00000468338 MTHFD1P11586 935 aaKnown RBP10.89□□□□□ -0.67
COL4A6-205ENST00000468338 EPB42P16452 691 aa10.89□□□□□ -0.67
COL4A6-205ENST00000468338 NSG1P42857 185 aa10.89□□□□□ -0.67
COL4A6-205ENST00000468338 ABCG1P45844 678 aa10.89□□□□□ -0.67
COL4A6-205ENST00000468338 CAPZBP47756 277 aa10.89□□□□□ -0.67
COL4A6-205ENST00000468338 NPY2RP49146 381 aa10.89□□□□□ -0.67
COL4A6-205ENST00000468338 BASP1P80723 227 aaKnown RBP10.89□□□□□ -0.67
COL4A6-205ENST00000468338 CCDC173Q0VFZ6 552 aa10.89□□□□□ -0.67
COL4A6-205ENST00000468338 RPA4Q13156 261 aa10.89□□□□□ -0.67
COL4A6-205ENST00000468338 AFTPHQ6ULP2 937 aa10.89□□□□□ -0.67
COL4A6-205ENST00000468338 CERS6Q6ZMG9 384 aa10.89□□□□□ -0.67
COL4A6-205ENST00000468338 PRICKLE2Q7Z3G6 844 aa10.89□□□□□ -0.67
COL4A6-205ENST00000468338 BTLAQ7Z6A9 289 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms