RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 LYPLAL1Q5VWZ2 237 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 ANKRD22Q5VYY1 191 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 ARMC6Q6NXE6 501 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 LRRC8BQ6P9F7 803 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 ZNF449Q6P9G9 518 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 KLHL35Q6PF15 583 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 CCDC137Q6PK04 289 aaKnown RBP11.25□□□□□ -0.61
CDHR3-205ENST00000468143 CEACAM20Q6UY09 585 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 CERS6Q6ZMG9 384 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 NLRP9Q7RTR0 991 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 TIPARPQ7Z3E1 657 aaKnown RBP11.25□□□□□ -0.61
CDHR3-205ENST00000468143 CACNA2D3Q8IZS8 1091 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 MPP5Q8N3R9 675 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 IL22RA1Q8N6P7 574 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 TFGQ92734 400 aaPredicted RBP11.25□□□□□ -0.61
CDHR3-205ENST00000468143 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.25□□□□□ -0.61
CDHR3-205ENST00000468143 PPM1MQ96MI6 270 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 UBL7Q96S82 380 aaPredicted RBP11.25□□□□□ -0.61
CDHR3-205ENST00000468143 TTC1Q99614 292 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 RAB33BQ9H082 229 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 ZNF768Q9H5H4 540 aaKnown RBP11.25□□□□□ -0.61
CDHR3-205ENST00000468143 XKR8Q9H6D3 395 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 SYBUQ9NX95 663 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 SIDT1Q9NXL6 827 aaKnown RBP11.25□□□□□ -0.61
CDHR3-205ENST00000468143 EPHA6Q9UF33 1036 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 ANAPC5Q9UJX4 755 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 RIMKLBQ9ULI2 386 aa11.25□□□□□ -0.61
CDHR3-205ENST00000468143 ZFC3H1O60293 1989 aaKnown RBP11.25□□□□□ -0.61
CDHR3-205ENST00000468143 ZNF106Q9H2Y7 1883 aaKnown RBP11.24□□□□□ -0.61
CDHR3-205ENST00000468143 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.24□□□□□ -0.61
CDHR3-205ENST00000468143 GOLGA8KD6RF30 607 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 GOLGA8TH3BQL2 631 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 GOLGA8MH3BSY2 632 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 PGRMC1O00264 195 aaKnown RBP11.24□□□□□ -0.61
CDHR3-205ENST00000468143 TOX3O15405 576 aaPredicted RBP11.24□□□□□ -0.61
CDHR3-205ENST00000468143 CD3EAPO15446 510 aaKnown RBP11.24□□□□□ -0.61
CDHR3-205ENST00000468143 VAPBO95292 243 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 FTH1P02794 183 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 OR56A5P0C7T3 313 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 ZNF28P17035 718 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 TPSB2P20231 275 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 NDUFS1P28331 727 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 CCR7P32248 378 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 ATP1A2P50993 1020 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 CYP4F2P78329 520 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 KCNJ11Q14654 390 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 TPSAB1Q15661 275 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 SYTL3Q4VX76 610 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 TAF1BQ53T94 588 aaPredicted RBP11.24□□□□□ -0.61
CDHR3-205ENST00000468143 DNTTIP2Q5QJE6 756 aaKnown RBP11.24□□□□□ -0.61
CDHR3-205ENST00000468143 PCSK4Q6UW60 755 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 PACS1Q6VY07 963 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 PRSS42Q7Z5A4 293 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 OOSP2Q86WS3 158 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 UNC5BQ8IZJ1 945 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 KRT222Q8N1A0 295 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 ACVR1CQ8NER5 493 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 OR52E1Q8NGJ3 308 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 LKAAEAR1Q8TD35 194 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 ZFPM2Q8WW38 1151 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 LCN9Q8WX39 176 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 KLHL6Q8WZ60 621 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 CPT1BQ92523 772 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 MFSD3Q96ES6 412 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 TEFMQ96QE5 360 aaKnown RBP11.24□□□□□ -0.61
CDHR3-205ENST00000468143 TRIM56Q9BRZ2 755 aaKnown RBP11.24□□□□□ -0.61
CDHR3-205ENST00000468143 HGH1Q9BTY7 390 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 SPRY4Q9C004 299 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 IL22Q9GZX6 179 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 SRMSQ9H3Y6 488 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 TREX1Q9NSU2 369 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 CATSPERZQ9NTU4 200 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 PILRAQ9UKJ1 303 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 PYCARDQ9ULZ3 195 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 SNX12Q9UMY4 172 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 HEBP2Q9Y5Z4 205 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 ZZEF1O43149 2961 aa11.24□□□□□ -0.61
CDHR3-205ENST00000468143 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.23□□□□□ -0.61
CDHR3-205ENST00000468143 SLC5A10A0PJK1 596 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 GSAPA4D1B5 854 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 EIF4E1BA6NMX2 242 aaKnown RBP11.23□□□□□ -0.61
CDHR3-205ENST00000468143 BHMG1C9JSJ3 638 aaPredicted RBP11.23□□□□□ -0.61
CDHR3-205ENST00000468143 AP3B1O00203 1094 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 QSOX1O00391 747 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 BTN3A3O00478 584 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 LIN7AO14910 233 aaPredicted RBP11.23□□□□□ -0.61
CDHR3-205ENST00000468143 STK17BO94768 372 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 TMEM63AO94886 807 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 EBLN1P0CF75 366 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 FOLR1P15328 257 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 NELFEP18615 380 aaKnown RBP11.23□□□□□ -0.61
CDHR3-205ENST00000468143 CD151P48509 253 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 ARL4DP49703 201 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 KPNA2P52292 529 aaKnown RBP11.23□□□□□ -0.61
CDHR3-205ENST00000468143 CDK16Q00536 496 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 RPA4Q13156 261 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 CYP1B1Q16678 543 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 CASC4Q6P4E1 433 aa11.23□□□□□ -0.61
CDHR3-205ENST00000468143 CAND1Q86VP6 1230 aaKnown RBP11.23□□□□□ -0.61
CDHR3-205ENST00000468143 RASGRP3Q8IV61 690 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms