RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 UMPSP11172 480 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 NAT2P11245 290 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 IL7RP16871 459 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 CYP2C18P33260 490 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 TBX4P57082 545 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 DEFA1P59665 94 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 DEFA3P59666 94 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 EIF2B5Q13144 721 aaKnown RBP17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 IMPG1Q17R60 797 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 MARC1Q5VT66 337 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 KDELC1Q6UW63 502 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 CFAP52Q8N1V2 620 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 PAPD5Q8NDF8 572 aaKnown RBP17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 MAP6Q96JE9 813 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 MUC13Q9H3R2 512 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 TLR9Q9NR96 1032 aa17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 UXTQ9UBK9 157 aaPredicted RBP17.79■□□□□ 0.44
SNAPC3-205ENST00000467062 BBIP1A8MTZ0 92 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 ERVH48-1M5A8F1 160 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 SEPT4O43236 478 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 KPNA6O60684 536 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 TRIM16O95361 564 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 PRSS56P0CW18 603 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 ACVRL1P37023 503 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 HADHAP40939 763 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 OR3A3P47888 321 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 FBXO48Q5FWF7 155 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 FBXL22Q6P050 247 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 TMEM207Q6UWW9 146 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 HORMAD1Q86X24 394 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 GATAD2AQ86YP4 633 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 PGBD5Q8N414 524 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 MCFD2Q8NI22 146 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 SERPINB11Q96P15 392 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 ANAPC2Q9UJX6 822 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 SCN10AQ9Y5Y9 1956 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 ARPC2O15144 300 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 INPP4BO15327 924 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 MMP2P08253 660 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 THRBP10828 461 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 NAGAP17050 411 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 SERPINH1P50454 418 aaKnown RBP17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 ALDH3A2P51648 485 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 CDKN2DP55273 166 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 OR2B6P58173 313 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 C1QTNF8P60827 252 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 VBP1P61758 197 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 LSM3P62310 102 aaKnown RBP17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 ZNF33AQ06730 810 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 TYSND1Q2T9J0 566 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 SPATS1Q496A3 300 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 GPR158Q5T848 1215 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 CLEC6AQ6EIG7 209 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 P2RY8Q86VZ1 359 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 KLHDC8BQ8IXV7 354 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 OR52K2Q8NGK3 314 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 PEX13Q92968 403 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 BTBD2Q9BX70 525 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 SLIRPQ9GZT3 109 aaKnown RBP17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 SP110Q9HB58 689 aa17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 PAK1IP1Q9NWT1 392 aaPredicted RBP17.78■□□□□ 0.44
SNAPC3-205ENST00000467062 NT5C1B-RDH14C9J2C7 533 aa17.77■□□□□ 0.44
SNAPC3-205ENST00000467062 NPHS1O60500 1241 aa17.77■□□□□ 0.44
SNAPC3-205ENST00000467062 PAMP19021 973 aa17.77■□□□□ 0.44
SNAPC3-205ENST00000467062 PCMT1P22061 227 aa17.77■□□□□ 0.44
SNAPC3-205ENST00000467062 ENPP1P22413 925 aa17.77■□□□□ 0.44
SNAPC3-205ENST00000467062 DDOSTP39656 456 aa17.77■□□□□ 0.44
SNAPC3-205ENST00000467062 MBTPS1Q14703 1052 aa17.77■□□□□ 0.44
SNAPC3-205ENST00000467062 ACOX1Q15067 660 aa17.77■□□□□ 0.44
SNAPC3-205ENST00000467062 OTUD3Q5T2D3 398 aaPredicted RBP17.77■□□□□ 0.44
SNAPC3-205ENST00000467062 AFMIDQ63HM1 303 aa17.77■□□□□ 0.44
SNAPC3-205ENST00000467062 TIGD7Q6NT04 549 aaPredicted RBP17.77■□□□□ 0.44
SNAPC3-205ENST00000467062 RGMBQ6NW40 437 aa17.77■□□□□ 0.44
SNAPC3-205ENST00000467062 MON1AQ86VX9 555 aa17.77■□□□□ 0.44
SNAPC3-205ENST00000467062 CLYBLQ8N0X4 340 aa17.77■□□□□ 0.44
SNAPC3-205ENST00000467062 CADM2Q8N3J6 435 aa17.77■□□□□ 0.44
SNAPC3-205ENST00000467062 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.77■□□□□ 0.441e-6■■■□□ 17.7
SNAPC3-205ENST00000467062 CITED4Q96RK1 184 aa17.77■□□□□ 0.44
SNAPC3-205ENST00000467062 SLC25A51Q9H1U9 297 aa17.77■□□□□ 0.44
SNAPC3-205ENST00000467062 CRISPLD1Q9H336 500 aa17.77■□□□□ 0.44
SNAPC3-205ENST00000467062 ALG9Q9H6U8 611 aa17.77■□□□□ 0.44
SNAPC3-205ENST00000467062 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.77■□□□□ 0.44
SNAPC3-205ENST00000467062 ARL5AQ9Y689 179 aa17.77■□□□□ 0.44
SNAPC3-205ENST00000467062 H0Y626 953 aa17.77■□□□□ 0.43
SNAPC3-205ENST00000467062 PPP6CO00743 305 aa17.77■□□□□ 0.43
SNAPC3-205ENST00000467062 TBC1D4O60343 1298 aa17.77■□□□□ 0.43
SNAPC3-205ENST00000467062 HTR3AP46098 478 aa17.77■□□□□ 0.43
SNAPC3-205ENST00000467062 GATMP50440 423 aa17.77■□□□□ 0.43
SNAPC3-205ENST00000467062 ARSFP54793 590 aa17.77■□□□□ 0.43
SNAPC3-205ENST00000467062 CDH13P55290 713 aa17.77■□□□□ 0.43
SNAPC3-205ENST00000467062 TAGLNQ01995 201 aaKnown RBP17.77■□□□□ 0.43
SNAPC3-205ENST00000467062 TBPL2Q6SJ96 375 aa17.77■□□□□ 0.43
SNAPC3-205ENST00000467062 GLB1LQ6UWU2 654 aa17.77■□□□□ 0.43
SNAPC3-205ENST00000467062 PLD3Q8IV08 490 aa17.77■□□□□ 0.43
SNAPC3-205ENST00000467062 CHDHQ8NE62 594 aaPredicted RBP17.77■□□□□ 0.43
SNAPC3-205ENST00000467062 BLOC1S5Q8TDH9 187 aa17.77■□□□□ 0.43
SNAPC3-205ENST00000467062 RORBQ92753 470 aa17.77■□□□□ 0.43
SNAPC3-205ENST00000467062 IMP4Q96G21 291 aaKnown RBP17.77■□□□□ 0.43
SNAPC3-205ENST00000467062 AURKBQ96GD4 344 aaPredicted RBP17.77■□□□□ 0.43
SNAPC3-205ENST00000467062 TBATAQ96M53 351 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms