RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 ARID1AO14497 2285 aa12.14□□□□□ -0.47
UBR4-210ENST00000466969 WFS1O76024 890 aa12.14□□□□□ -0.47
UBR4-210ENST00000466969 VCLP18206 1134 aa12.14□□□□□ -0.47
UBR4-210ENST00000466969 FMO5P49326 533 aa12.14□□□□□ -0.47
UBR4-210ENST00000466969 SNTB1Q13884 538 aaKnown RBP12.14□□□□□ -0.47
UBR4-210ENST00000466969 PRSS57Q6UWY2 283 aa12.14□□□□□ -0.47
UBR4-210ENST00000466969 CD163Q86VB7 1156 aa12.14□□□□□ -0.47
UBR4-210ENST00000466969 LRRC75A-AS1Q8N1F1 130 aa12.14□□□□□ -0.47
UBR4-210ENST00000466969 UMODL1-AS1Q8N2C9 162 aa12.14□□□□□ -0.47
UBR4-210ENST00000466969 PSMF1Q92530 271 aa12.14□□□□□ -0.47
UBR4-210ENST00000466969 KREMEN1Q96MU8 473 aa12.14□□□□□ -0.47
UBR4-210ENST00000466969 KCTD15Q96SI1 283 aaPredicted RBP12.14□□□□□ -0.47
UBR4-210ENST00000466969 TRIM51Q9BSJ1 452 aa12.14□□□□□ -0.47
UBR4-210ENST00000466969 MAGEB5Q9BZ81 275 aa12.14□□□□□ -0.47
UBR4-210ENST00000466969 ARFGAP3Q9NP61 516 aa12.14□□□□□ -0.47
UBR4-210ENST00000466969 TAS2R14Q9NYV8 317 aa12.14□□□□□ -0.47
UBR4-210ENST00000466969 WDR37Q9Y2I8 494 aa12.14□□□□□ -0.47
UBR4-210ENST00000466969 ASB1Q9Y576 335 aa12.14□□□□□ -0.47
UBR4-210ENST00000466969 TTC24A2A3L6 582 aaPredicted RBP12.13□□□□□ -0.47
UBR4-210ENST00000466969 FADS2P1A8MWK0 482 aa12.13□□□□□ -0.47
UBR4-210ENST00000466969 ACTN4O43707 911 aaKnown RBP12.13□□□□□ -0.47
UBR4-210ENST00000466969 PRR35P0CG20 571 aa12.13□□□□□ -0.47
UBR4-210ENST00000466969 ITGAXP20702 1163 aa12.13□□□□□ -0.47
UBR4-210ENST00000466969 RFTN1Q14699 578 aaPredicted RBP12.13□□□□□ -0.47
UBR4-210ENST00000466969 CDO1Q16878 200 aa12.13□□□□□ -0.47
UBR4-210ENST00000466969 YTHDF3Q7Z739 585 aaKnown RBP12.13□□□□□ -0.47
UBR4-210ENST00000466969 FAM57AQ8TBR7 257 aa12.13□□□□□ -0.47
UBR4-210ENST00000466969 SLC35C1Q96A29 364 aa12.13□□□□□ -0.47
UBR4-210ENST00000466969 CCDC47Q96A33 483 aaKnown RBP12.13□□□□□ -0.47
UBR4-210ENST00000466969 FKBP10Q96AY3 582 aa12.13□□□□□ -0.47
UBR4-210ENST00000466969 SEC16BQ96JE7 1060 aa12.13□□□□□ -0.47
UBR4-210ENST00000466969 WDR54Q9H977 334 aa12.13□□□□□ -0.47
UBR4-210ENST00000466969 SP110Q9HB58 689 aa12.13□□□□□ -0.47
UBR4-210ENST00000466969 TRIM39Q9HCM9 518 aa12.13□□□□□ -0.47
UBR4-210ENST00000466969 MKL2Q9ULH7 1088 aa12.13□□□□□ -0.47
UBR4-210ENST00000466969 PCDHGC3Q9UN70 934 aa12.13□□□□□ -0.47
UBR4-210ENST00000466969 NSG1A0A0A6YYJ2 146 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 ARHGAP42A6NI28 874 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 USP27XA6NNY8 438 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 CLDN4O14493 209 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 MAP2K7O14733 419 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 SLC16A3O15427 465 aaKnown RBP12.12□□□□□ -0.47
UBR4-210ENST00000466969 SMPD2O60906 423 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 SLC25A14O95258 325 aaPredicted RBP12.12□□□□□ -0.47
UBR4-210ENST00000466969 BMP10O95393 424 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 ACPPP15309 386 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 ST6GAL1P15907 406 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 POLR2CP19387 275 aaPredicted RBP12.12□□□□□ -0.47
UBR4-210ENST00000466969 IL4RP24394 825 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 PTGS2P35354 604 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 NSG1P42857 185 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 STC1P52823 247 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 DMTNQ08495 405 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 GALNT3Q14435 633 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 RPE65Q16518 533 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 FLYWCH1Q4VC44 716 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 ZCWPW2Q504Y3 356 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 ZNF648Q5T619 568 aaPredicted RBP12.12□□□□□ -0.47
UBR4-210ENST00000466969 ARMC12Q5T9G4 340 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 ABHD17BQ5VST6 288 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 SHISA6Q6ZSJ9 500 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 CXorf67Q86X51 503 aaPredicted RBP12.12□□□□□ -0.47
UBR4-210ENST00000466969 HIPK1Q86Z02 1210 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 SOX17Q9H6I2 414 aaPredicted RBP12.12□□□□□ -0.47
UBR4-210ENST00000466969 PLEKHF2Q9H8W4 249 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 IRAK4Q9NWZ3 460 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 ARMCX3Q9UH62 379 aaPredicted RBP12.12□□□□□ -0.47
UBR4-210ENST00000466969 POMT2Q9UKY4 750 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 CBLCQ9ULV8 474 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 PPIL1Q9Y3C6 166 aa12.12□□□□□ -0.47
UBR4-210ENST00000466969 MATN2O00339 956 aa12.11□□□□□ -0.47
UBR4-210ENST00000466969 CHUKO15111 745 aa12.11□□□□□ -0.47
UBR4-210ENST00000466969 ZSCAN9O15535 394 aaPredicted RBP12.11□□□□□ -0.47
UBR4-210ENST00000466969 PGLSO95336 258 aa12.11□□□□□ -0.47
UBR4-210ENST00000466969 ALBP02768 609 aa12.11□□□□□ -0.47
UBR4-210ENST00000466969 PIM1P11309 404 aaPredicted RBP12.11□□□□□ -0.47
UBR4-210ENST00000466969 MX2P20592 715 aa12.11□□□□□ -0.47
UBR4-210ENST00000466969 ALAS2P22557 587 aa12.11□□□□□ -0.47
UBR4-210ENST00000466969 EEF1DP29692 281 aaKnown RBP12.11□□□□□ -0.47
UBR4-210ENST00000466969 USP8P40818 1118 aa12.11□□□□□ -0.47
UBR4-210ENST00000466969 PAPOLAP51003 745 aaKnown RBP12.11□□□□□ -0.47
UBR4-210ENST00000466969 PMPCAQ10713 525 aa12.11□□□□□ -0.47
UBR4-210ENST00000466969 TRAF2Q12933 501 aa12.11□□□□□ -0.47
UBR4-210ENST00000466969 NKG7Q16617 165 aa12.11□□□□□ -0.47
UBR4-210ENST00000466969 PDLIM3Q53GG5 364 aaPredicted RBP12.11□□□□□ -0.47
UBR4-210ENST00000466969 TFDP3Q5H9I0 405 aa12.11□□□□□ -0.47
UBR4-210ENST00000466969 HIST2H2BDQ6DRA6 164 aa12.11□□□□□ -0.47
UBR4-210ENST00000466969 TIGD7Q6NT04 549 aaPredicted RBP12.11□□□□□ -0.47
UBR4-210ENST00000466969 CDHR3Q6ZTQ4 885 aa12.11□□□□□ -0.47
UBR4-210ENST00000466969 ACAD11Q709F0 780 aa12.11□□□□□ -0.47
UBR4-210ENST00000466969 OVCH1Q7RTY7 1134 aa12.11□□□□□ -0.47
UBR4-210ENST00000466969 SIAH3Q8IW03 269 aa12.11□□□□□ -0.47
UBR4-210ENST00000466969 CHERPQ8IWX8 916 aaKnown RBP12.11□□□□□ -0.47
UBR4-210ENST00000466969 RAVER1Q8IY67 606 aaKnown RBP12.11□□□□□ -0.47
UBR4-210ENST00000466969 FAM98AQ8NCA5 519 aaKnown RBP12.11□□□□□ -0.47
UBR4-210ENST00000466969 FAM222BQ8WU58 562 aa12.11□□□□□ -0.47
UBR4-210ENST00000466969 ZNF592Q92610 1267 aa12.11□□□□□ -0.47
UBR4-210ENST00000466969 CELF6Q96J87 481 aaKnown RBP12.11□□□□□ -0.47
UBR4-210ENST00000466969 PSKH2Q96QS6 385 aa12.11□□□□□ -0.47
UBR4-210ENST00000466969 SPSB2Q99619 263 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms