RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 USP10Q14694 798 aaKnown RBP14.87□□□□□ -0.03
NPHP4-205ENST00000466897 KIR2DS5Q14953 304 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 CAPRIN2Q6IMN6 1127 aaKnown RBP14.87□□□□□ -0.03
NPHP4-205ENST00000466897 IYDQ6PHW0 289 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 LRIG3Q6UXM1 1119 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 TIFABQ6ZNK6 161 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 CROCCP2Q86T23 111 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 PDZD3Q86UT5 571 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 GATAD2AQ86YP4 633 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 LILRA3Q8N6C8 439 aaPredicted RBP14.87□□□□□ -0.03
NPHP4-205ENST00000466897 SIDT2Q8NBJ9 832 aaKnown RBP14.87□□□□□ -0.03
NPHP4-205ENST00000466897 FAM46DQ8NEK8 389 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 ACVR1CQ8NER5 493 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 SLC30A3Q99726 388 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 SYTL2Q9HCH5 934 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 NCKIPSDQ9NZQ3 722 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 GALPQ9UBC7 116 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 SLC39A10Q9ULF5 831 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 PLAAQ9Y263 795 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 ZNF292O60281 2723 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 RASGRF2O14827 1237 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 MPC1LP0DKB6 136 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 CD59P13987 128 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 BRAFP15056 766 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 ACADLP28330 430 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 CRABP2P29373 138 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 SLC26A3P40879 764 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 RGS4P49798 205 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 SERPINB8P50452 374 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 IFFO1Q0D2I5 559 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 DEFB133Q30KQ1 61 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 MROH9Q5TGP6 573 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 FBXO38Q6PIJ6 1188 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 PIM3Q86V86 326 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 CEP97Q8IW35 865 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 NAGSQ8N159 534 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 SFRP1Q8N474 314 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 ARL10Q8N8L6 244 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 GPR156Q8NFN8 814 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 ZDHHC1Q8WTX9 485 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 ANKRD7Q92527 254 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 MRRFQ96E11 262 aaKnown RBP14.86□□□□□ -0.03
NPHP4-205ENST00000466897 PDLIM5Q96HC4 596 aaKnown RBP14.86□□□□□ -0.03
NPHP4-205ENST00000466897 SARS2Q9NP81 518 aaKnown RBP14.86□□□□□ -0.03
NPHP4-205ENST00000466897 PRDM8Q9NQV8 689 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 LGALS13Q9UHV8 139 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 WDR37Q9Y2I8 494 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 HEBP2Q9Y5Z4 205 aa14.86□□□□□ -0.03
NPHP4-205ENST00000466897 FAM186AA6NE01 2351 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 PDZK1P1A8MUH7 402 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 IFRD1O00458 451 aaPredicted RBP14.85□□□□□ -0.03
NPHP4-205ENST00000466897 NOBOXO60393 691 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 MATN4O95460 622 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 EML2O95834 649 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 TSPAN12O95859 305 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 ALDOAP04075 364 aaKnown RBP14.85□□□□□ -0.03
NPHP4-205ENST00000466897 XRCC1P18887 633 aaPredicted RBP14.85□□□□□ -0.03
NPHP4-205ENST00000466897 RPL10P27635 214 aaKnown RBP14.85□□□□□ -0.03
NPHP4-205ENST00000466897 PDHA2P29803 388 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 FASLGP48023 281 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 PREPP48147 710 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 IL2P60568 153 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 BMPR2Q13873 1038 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 CASP8Q14790 479 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 ACSBG2Q5FVE4 666 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 STPG1Q5TH74 334 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 PAQR3Q6TCH7 311 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 UNC5DQ6UXZ4 953 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 VRK3Q8IV63 474 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 CPNE9Q8IYJ1 553 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 NKAPQ8N5F7 415 aaKnown RBP14.85□□□□□ -0.03
NPHP4-205ENST00000466897 OR2W6PQ8NHA6 318 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 EPS8L3Q8TE67 593 aaKnown RBP14.85□□□□□ -0.03
NPHP4-205ENST00000466897 MZB1Q8WU39 189 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 ZFPM2Q8WW38 1151 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 FAM136AQ96C01 138 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 PKNOX2Q96KN3 472 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 RMDN2Q96LZ7 410 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 WWP1Q9H0M0 922 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 GPAMQ9HCL2 828 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 POT1Q9NUX5 634 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 EP300Q09472 2414 aaPredicted RBP14.85□□□□□ -0.03
NPHP4-205ENST00000466897 WDR87Q6ZQQ6 2873 aa14.85□□□□□ -0.03
NPHP4-205ENST00000466897 CCDC189A1A4V9 331 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 C4orf47A7E2U8 309 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 B4DGG1 531 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 TRIM38O00635 465 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 FFAR2O15552 330 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 SNX2O60749 519 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 SLC35E2BP0CK96 405 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 MTHFD1P11586 935 aaKnown RBP14.84□□□□□ -0.03
NPHP4-205ENST00000466897 NDUFS1P28331 727 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 UBE2IP63279 158 aaKnown RBP14.84□□□□□ -0.03
NPHP4-205ENST00000466897 ZNF844Q08AG5 666 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 CLCA4Q14CN2 919 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 TCEA2Q15560 299 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 C14orf28Q4W4Y0 310 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 NAPRTQ6XQN6 538 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 RASGRP3Q8IV61 690 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 RBM12BQ8IXT5 1001 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms