RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 IPO8O15397 1037 aaKnown RBP4.04□□□□□ -1.76
LRCH3-211ENST00000466054 TIMM44O43615 452 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 PLOD3O60568 738 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 BAG4O95429 457 aaKnown RBP4.04□□□□□ -1.76
LRCH3-211ENST00000466054 LIPFP07098 398 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 H1F0P07305 194 aaKnown RBP4.04□□□□□ -1.76
LRCH3-211ENST00000466054 MMP15P51511 669 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 DVL1P1P54792 670 aaPredicted RBP4.04□□□□□ -1.76
LRCH3-211ENST00000466054 UBXN2AP68543 259 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 CDK3Q00526 305 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 KIR2DS3Q14952 304 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 CBWD6Q4V339 395 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 CBWD3Q5JTY5 395 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 NDUFAF5Q5TEU4 345 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 ALS2CLQ60I27 953 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 KLC3Q6P597 504 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 ZNF771Q7L3S4 317 aaPredicted RBP4.04□□□□□ -1.76
LRCH3-211ENST00000466054 PIWIL4Q7Z3Z4 852 aaKnown RBP4.04□□□□□ -1.76
LRCH3-211ENST00000466054 PTOV1Q86YD1 416 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 GPALPP1Q8IXQ4 340 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 OR8H2Q8N162 312 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 PPFIBP2Q8ND30 876 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 DMBX1Q8NFW5 382 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 OR13A1Q8NGR1 328 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 MOSPD2Q8NHP6 518 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 SEMA4DQ92854 862 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 PTERQ96BW5 349 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 MTERF3Q96E29 417 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 FAM81BQ96LP2 452 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 SLX1AQ9BQ83 275 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 SLA2Q9H6Q3 261 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 TRPC7Q9HCX4 862 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 MIOSQ9NXC5 875 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 CRNNQ9UBG3 495 aaPredicted RBP4.04□□□□□ -1.76
LRCH3-211ENST00000466054 IL17BQ9UHF5 180 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 DDX25Q9UHL0 483 aaKnown RBP4.04□□□□□ -1.76
LRCH3-211ENST00000466054 GRIP1Q9Y3R0 1128 aa4.04□□□□□ -1.76
LRCH3-211ENST00000466054 MED19A0JLT2 244 aaPredicted RBP4.03□□□□□ -1.76
LRCH3-211ENST00000466054 ELOVL7A1L3X0 281 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 FAM172BPA6NC97 362 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 BMPR1BO00238 502 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 P4HA2O15460 535 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 TSPAN1O60635 241 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 CTSVO60911 334 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 MED24O75448 989 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 ZWINTO95229 277 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 GCNT3O95395 438 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 BCL10O95999 233 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 ATP1A1P05023 1023 aaKnown RBP4.03□□□□□ -1.76
LRCH3-211ENST00000466054 SP1P08047 785 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 NR2C2P49116 596 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 SNAPC1Q16533 368 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 C9orf152Q5JTZ5 239 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 SLC30A6Q6NXT4 461 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 LINGO4Q6UY18 593 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 FBXO39Q8N4B4 442 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 L3MBTL4Q8NA19 623 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 EXD1Q8NHP7 514 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 ARSGQ96EG1 525 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 PRMT6Q96LA8 375 aaPredicted RBP4.03□□□□□ -1.76
LRCH3-211ENST00000466054 C17orf77Q96MU5 243 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 ZNF583Q96ND8 569 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 ZNF582Q96NG8 517 aaPredicted RBP4.03□□□□□ -1.76
LRCH3-211ENST00000466054 MS4A10Q96PG2 267 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 NODALQ96S42 347 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 EPYCQ99645 322 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 CCDC106Q9BWC9 280 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 TXLNGYQ9BZA5 131 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 FAM118AQ9NWS6 357 aa4.03□□□□□ -1.76
LRCH3-211ENST00000466054 TEX13DA0A0J9YY54 714 aaPredicted RBP4.02□□□□□ -1.77
LRCH3-211ENST00000466054 PRSS51A0A1B0GVH4 220 aa4.02□□□□□ -1.77
LRCH3-211ENST00000466054 HEPACAM2A8MVW5 462 aa4.02□□□□□ -1.77
LRCH3-211ENST00000466054 PRR32B1ATL7 298 aa4.02□□□□□ -1.77
LRCH3-211ENST00000466054 FGF17O60258 216 aa4.02□□□□□ -1.77
LRCH3-211ENST00000466054 CRYAAP02489 173 aa4.02□□□□□ -1.77
LRCH3-211ENST00000466054 KRT19P08727 400 aa4.02□□□□□ -1.77
LRCH3-211ENST00000466054 KRT20P35900 424 aa4.02□□□□□ -1.77
LRCH3-211ENST00000466054 ARL16Q0P5N6 197 aa4.02□□□□□ -1.77
LRCH3-211ENST00000466054 PLA2G7Q13093 441 aa4.02□□□□□ -1.77
LRCH3-211ENST00000466054 MFAP5Q13361 173 aa4.02□□□□□ -1.77
LRCH3-211ENST00000466054 PRPF4BQ13523 1007 aaKnown RBP4.02□□□□□ -1.77
LRCH3-211ENST00000466054 TMEM266Q2M3C6 531 aa4.02□□□□□ -1.77
LRCH3-211ENST00000466054 TMEM211Q6ICI0 200 aa4.02□□□□□ -1.77
LRCH3-211ENST00000466054 ADAM5Q6NVV9 412 aa4.02□□□□□ -1.77
LRCH3-211ENST00000466054 FIGLAQ6QHK4 219 aa4.02□□□□□ -1.77
LRCH3-211ENST00000466054 NME8Q8N427 588 aa4.02□□□□□ -1.77
LRCH3-211ENST00000466054 LMNTD1Q8N9Z9 388 aa4.02□□□□□ -1.77
LRCH3-211ENST00000466054 KBTBD3Q8NAB2 608 aa4.02□□□□□ -1.77
LRCH3-211ENST00000466054 SPACA9Q96E40 222 aaPredicted RBP4.02□□□□□ -1.77
LRCH3-211ENST00000466054 C16orf70Q9BSU1 422 aa4.02□□□□□ -1.77
LRCH3-211ENST00000466054 TRMT61BQ9BVS5 477 aaKnown RBP4.02□□□□□ -1.77
LRCH3-211ENST00000466054 APOBEC3GQ9HC16 384 aaKnown RBP4.02□□□□□ -1.77
LRCH3-211ENST00000466054 ZBTB20Q9HC78 741 aaPredicted RBP4.02□□□□□ -1.77
LRCH3-211ENST00000466054 TAB2Q9NYJ8 693 aa4.02□□□□□ -1.77
LRCH3-211ENST00000466054 NPAP1Q9NZP6 1156 aa4.02□□□□□ -1.77
LRCH3-211ENST00000466054 TRPV2Q9Y5S1 764 aa4.02□□□□□ -1.77
LRCH3-211ENST00000466054 PRKNO60260 465 aaPredicted RBP4.01□□□□□ -1.77
LRCH3-211ENST00000466054 IGLV2-11P01706 119 aa4.01□□□□□ -1.77
LRCH3-211ENST00000466054 PAX1P15863 534 aa4.01□□□□□ -1.77
LRCH3-211ENST00000466054 MARK3P27448 753 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms