RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 RPS9P46781 194 aaKnown RBP8.66□□□□□ -1.02
UBA3-208ENST00000465627 GLRBP48167 497 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 DNAJB13P59910 316 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 ATP6V0D1P61421 351 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 NFKB2Q00653 900 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 OCRLQ01968 901 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 CSTF1Q05048 431 aaKnown RBP8.66□□□□□ -1.02
UBA3-208ENST00000465627 TMEM115Q12893 351 aaPredicted RBP8.66□□□□□ -1.02
UBA3-208ENST00000465627 IRF4Q15306 451 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 PPP1R3AQ16821 1122 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 TTC31Q49AM3 519 aaPredicted RBP8.66□□□□□ -1.02
UBA3-208ENST00000465627 ACSBG2Q5FVE4 666 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 SBSNQ6UWP8 590 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 NAPRTQ6XQN6 538 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 PIGWQ7Z7B1 504 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 TBC1D1Q86TI0 1168 aaPredicted RBP8.66□□□□□ -1.02
UBA3-208ENST00000465627 PHYKPLQ8IUZ5 450 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 ZNF547Q8IVP9 402 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 C10orf107Q8IVU9 208 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 CPNE9Q8IYJ1 553 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 NKAPQ8N5F7 415 aaKnown RBP8.66□□□□□ -1.02
UBA3-208ENST00000465627 ZBTB44Q8NCP5 570 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 PJA1Q8NG27 643 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 OR14C36Q8NHC7 312 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 EEF1AKMT1Q8WVE0 214 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 HPS1Q92902 700 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 FAM136AQ96C01 138 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 SGF29Q96ES7 293 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 CHMP6Q96FZ7 201 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 SHDQ96IW2 340 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 LENG8Q96PV6 779 aaPredicted RBP8.66□□□□□ -1.02
UBA3-208ENST00000465627 ORAI3Q9BRQ5 295 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 SLC17A9Q9BYT1 436 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 IQCGQ9H095 443 aaKnown RBP8.66□□□□□ -1.02
UBA3-208ENST00000465627 CCDC68Q9H2F9 335 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 MANSC1Q9H8J5 431 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 SYTL2Q9HCH5 934 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 TRIM39Q9HCM9 518 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 SLCO1B3Q9NPD5 702 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 SPATS2LQ9NUQ6 558 aaKnown RBP8.66□□□□□ -1.02
UBA3-208ENST00000465627 TRMT6Q9UJA5 497 aaKnown RBP8.66□□□□□ -1.02
UBA3-208ENST00000465627 MRPS17Q9Y2R5 130 aaKnown RBP8.66□□□□□ -1.02
UBA3-208ENST00000465627 PCDHGA2Q9Y5H1 932 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 CREBBPQ92793 2442 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 DOPEY2Q9Y3R5 2298 aa8.66□□□□□ -1.02
UBA3-208ENST00000465627 LRP4O75096 1905 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 SLC5A10A0PJK1 596 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 WDR91A4D1P6 747 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 TMEM202A6NGA9 273 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 A8MT66 165 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 CDC7O00311 574 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 NEMP1O14524 444 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 TERTO14746 1132 aaKnown RBP8.65□□□□□ -1.02
UBA3-208ENST00000465627 KERAO60938 352 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 SLCO2B1O94956 709 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 PCDH8O95206 1070 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 FAM107AO95990 144 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 PAK4O96013 591 aaPredicted RBP8.65□□□□□ -1.02
UBA3-208ENST00000465627 FUCA1P04066 466 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 HOXC4P09017 264 aaPredicted RBP8.65□□□□□ -1.02
UBA3-208ENST00000465627 RBP1P09455 135 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 OR56A5P0C7T3 313 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 CBSLP0DN79 551 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 CBSP35520 551 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 GPR1P46091 355 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 HK3P52790 923 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 IL2P60568 153 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 IRX4P78413 519 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 CDK3Q00526 305 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 BST1Q10588 318 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 TSNQ15631 228 aaKnown RBP8.65□□□□□ -1.02
UBA3-208ENST00000465627 ZNF528Q3MIS6 628 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 PTRHD1Q6GMV3 140 aaKnown RBP8.65□□□□□ -1.02
UBA3-208ENST00000465627 UGT3A1Q6NUS8 523 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 TSSK4Q6SA08 328 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 ZNF605Q86T29 641 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 TRIM74Q86UV6 250 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 VRK3Q8IV63 474 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 ZBTB2Q8N680 514 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 OR2T34Q8NGX1 318 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 DLG3Q92796 817 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 SCARF2Q96GP6 870 aaPredicted RBP8.65□□□□□ -1.02
UBA3-208ENST00000465627 HIC2Q96JB3 615 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 CCT8L2Q96SF2 557 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 SORT1Q99523 831 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 GATA5Q9BWX5 397 aaPredicted RBP8.65□□□□□ -1.02
UBA3-208ENST00000465627 LGR4Q9BXB1 951 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 UNKQ9C0B0 810 aaKnown RBP8.65□□□□□ -1.02
UBA3-208ENST00000465627 ALG9Q9H6U8 611 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 EBF2Q9HAK2 575 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 SGK2Q9HBY8 427 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 CPSF2Q9P2I0 782 aaKnown RBP8.65□□□□□ -1.02
UBA3-208ENST00000465627 ATXN10Q9UBB4 475 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 HAO1Q9UJM8 370 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 APC2O95996 2303 aa8.65□□□□□ -1.02
UBA3-208ENST00000465627 NEMP2A6NFY4 417 aa8.64□□□□□ -1.03
UBA3-208ENST00000465627 E5RI56 91 aa8.64□□□□□ -1.03
UBA3-208ENST00000465627 GFYI3L273 518 aa8.64□□□□□ -1.03
UBA3-208ENST00000465627 J3QKU1 62 aa8.64□□□□□ -1.03
UBA3-208ENST00000465627 K7ESF4 209 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms