RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 ABCG4Q9H172 646 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 SLCO1B3Q9NPD5 702 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 COPG2Q9UBF2 871 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 EMCNQ9ULC0 261 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 PKP3Q9Y446 797 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 PCDHGC4Q9Y5F7 938 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 ARL5AQ9Y689 179 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 COMMD10Q9Y6G5 202 aa13.64□□□□□ -0.23
HDAC6-215ENST00000465457 CCDC189A1A4V9 331 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 CCDC162PA2VCL2 907 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 STX7O15400 261 aaKnown RBP13.63□□□□□ -0.23
HDAC6-215ENST00000465457 SLC31A1O15431 190 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 SNNO75324 88 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-215ENST00000465457 TNFSF15O95150 251 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 KLHL2O95198 593 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 S1PR4O95977 384 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 GOT2P00505 430 aaKnown RBP13.63□□□□□ -0.23
HDAC6-215ENST00000465457 ASLP04424 464 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 SLC35E2BP0CK96 405 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 GP1BBP13224 206 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 PPARGP37231 505 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-215ENST00000465457 TTPAP49638 278 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 ARSDP51689 593 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 HK2P52789 917 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 CLDN2P57739 230 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 OCRLQ01968 901 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 CNTN1Q12860 1018 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 FAM83EQ2M2I3 478 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 PERM1Q5SV97 790 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 CGB2Q6NT52 195 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 PTAR1Q7Z6K3 402 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-215ENST00000465457 TRIM69Q86WT6 500 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 PPP4R1Q8TF05 950 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 CCT6BQ92526 530 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 CDKN2AIPNLQ96HQ2 116 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 ZNF641Q96N77 438 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-215ENST00000465457 CPEB1Q9BZB8 566 aaKnown RBP13.63□□□□□ -0.23
HDAC6-215ENST00000465457 C12orf65Q9H3J6 166 aaKnown RBP13.63□□□□□ -0.23
HDAC6-215ENST00000465457 STN1Q9H668 368 aaKnown RBP13.63□□□□□ -0.23
HDAC6-215ENST00000465457 CAB39LQ9H9S4 337 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 FBXO6Q9NRD1 293 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-215ENST00000465457 NLGN3Q9NZ94 848 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 TMEM216Q9P0N5 145 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 ATXN7L1Q9ULK2 861 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-215ENST00000465457 DMTF1Q9Y222 760 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 RRP15Q9Y3B9 282 aaKnown RBP13.63□□□□□ -0.23
HDAC6-215ENST00000465457 ZNF711Q9Y462 761 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 PCDHGA8Q9Y5G5 932 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 SPO11Q9Y5K1 396 aa13.63□□□□□ -0.23
HDAC6-215ENST00000465457 CPED1A4D0V7 1026 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 PRAMEF26H0Y7S4 382 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 NOBOXO60393 691 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 HAUS5O94927 633 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 PDHA1P08559 390 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 MYL2P10916 166 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 SRCP12931 536 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 WT1P19544 449 aaPredicted RBP13.62□□□□□ -0.23
HDAC6-215ENST00000465457 HMGCLP35914 325 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 SERPINB5P36952 375 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 NNMTP40261 264 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 CYP4F2P78329 520 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 ECT2LQ008S8 904 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 BST1Q10588 318 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 OVGP1Q12889 678 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 UBAP2LQ14157 1087 aaKnown RBP13.62□□□□□ -0.23
HDAC6-215ENST00000465457 ELAVL3Q14576 367 aaKnown RBP13.62□□□□□ -0.23
HDAC6-215ENST00000465457 PCLAFQ15004 111 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 SETMARQ53H47 684 aaPredicted RBP13.62□□□□□ -0.23
HDAC6-215ENST00000465457 ATXN7L2Q5T6C5 722 aaPredicted RBP13.62□□□□□ -0.23
HDAC6-215ENST00000465457 AGAP9Q5VTM2 703 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 ZYG11AQ6WRX3 759 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 CERS6Q6ZMG9 384 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 GCNT7Q6ZNI0 430 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 EFL1Q7Z2Z2 1120 aaKnown RBP13.62□□□□□ -0.23
HDAC6-215ENST00000465457 TTC30BQ8N4P2 665 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 PAF1Q8N7H5 531 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 OR4K2Q8NGD2 314 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 PDCD6IPQ8WUM4 868 aaKnown RBP13.62□□□□□ -0.23
HDAC6-215ENST00000465457 CCDC126Q96EE4 140 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 TBATAQ96M53 351 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 TTC1Q99614 292 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 MRPL57Q9BQC6 102 aaKnown RBP13.62□□□□□ -0.23
HDAC6-215ENST00000465457 CCDC68Q9H2F9 335 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 MRPL46Q9H2W6 279 aaKnown RBP13.62□□□□□ -0.23
HDAC6-215ENST00000465457 VWA7Q9Y334 891 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 CREBBPQ92793 2442 aa13.62□□□□□ -0.23
HDAC6-215ENST00000465457 A0A0J9YYE9 177 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 TRAFD1O14545 582 aaPredicted RBP13.61□□□□□ -0.23
HDAC6-215ENST00000465457 MAGEC1O60732 1142 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 POP4O95707 220 aaKnown RBP13.61□□□□□ -0.23
HDAC6-215ENST00000465457 MT-CO1P00395 513 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 TRBC1P01850 177 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 SRPRAP08240 638 aaKnown RBP13.61□□□□□ -0.23
HDAC6-215ENST00000465457 RBP1P09455 135 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 LTA4HP09960 611 aaKnown RBP13.61□□□□□ -0.23
HDAC6-215ENST00000465457 RALBP11234 206 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 FGF3P11487 239 aaPredicted RBP13.61□□□□□ -0.23
HDAC6-215ENST00000465457 CD9P21926 228 aa13.61□□□□□ -0.23
HDAC6-215ENST00000465457 RECQLP46063 649 aaPredicted RBP13.61□□□□□ -0.23
HDAC6-215ENST00000465457 SUOXP51687 545 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms