RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 RPS3P23396 243 aaKnown RBP eCLIP17.13■□□□□ 0.33
CPSF4-209ENST00000465132 ARNTP27540 789 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 SSTR1P30872 391 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 VSNL1P62760 191 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 PLOD1Q02809 727 aaPredicted RBP17.13■□□□□ 0.33
CPSF4-209ENST00000465132 ILF3Q12906 894 aaKnown RBP eCLIP17.13■□□□□ 0.33
CPSF4-209ENST00000465132 BRD3Q15059 726 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 DBN1Q16643 649 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 KCTD16Q68DU8 428 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 TAOK1Q7L7X3 1001 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 RAB11FIP2Q7L804 512 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 ADGRG6Q86SQ4 1221 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 TRAPPC5Q8IUR0 188 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 FBXO39Q8N4B4 442 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 OR6C4Q8NGE1 309 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 PDXPQ96GD0 296 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 OR2M4Q96R27 311 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 GSDMCQ9BYG8 508 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 STRADBQ9C0K7 418 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 CARS2Q9HA77 564 aaKnown RBP17.13■□□□□ 0.33
CPSF4-209ENST00000465132 PPCSQ9HAB8 311 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 CYP4F12Q9HCS2 524 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 ARGLU1Q9NWB6 273 aaPredicted RBP17.13■□□□□ 0.33
CPSF4-209ENST00000465132 NINJ2Q9NZG7 142 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 ATXN10Q9UBB4 475 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 PCDHGA7Q9Y5G6 932 aa17.13■□□□□ 0.33
CPSF4-209ENST00000465132 KIF26BQ2KJY2 2108 aa17.12■□□□□ 0.33
CPSF4-209ENST00000465132 FLNBO75369 2602 aaKnown RBP17.12■□□□□ 0.33
CPSF4-209ENST00000465132 SETXQ7Z333 2677 aaKnown RBP17.12■□□□□ 0.33
CPSF4-209ENST00000465132 ATMQ13315 3056 aa17.12■□□□□ 0.33
CPSF4-209ENST00000465132 TCRBV9S1A1TA0A576 114 aa17.12■□□□□ 0.33
CPSF4-209ENST00000465132 TMEM202A6NGA9 273 aa17.12■□□□□ 0.33
CPSF4-209ENST00000465132 OR51F1A6NGY5 319 aa17.12■□□□□ 0.33
CPSF4-209ENST00000465132 CHUKO15111 745 aa17.12■□□□□ 0.33
CPSF4-209ENST00000465132 SLC5A2P31639 672 aa17.12■□□□□ 0.33
CPSF4-209ENST00000465132 LEPRP48357 1165 aaKnown RBP17.12■□□□□ 0.33
CPSF4-209ENST00000465132 INHBCP55103 352 aa17.12■□□□□ 0.33
CPSF4-209ENST00000465132 BCL7AQ4VC05 210 aa17.12■□□□□ 0.33
CPSF4-209ENST00000465132 PTRHD1Q6GMV3 140 aaKnown RBP17.12■□□□□ 0.33
CPSF4-209ENST00000465132 CAPN12Q6ZSI9 719 aa17.12■□□□□ 0.33
CPSF4-209ENST00000465132 PIANPQ8IYJ0 282 aa17.12■□□□□ 0.33
CPSF4-209ENST00000465132 PELI3Q8N2H9 469 aa17.12■□□□□ 0.33
CPSF4-209ENST00000465132 BEND7Q8N7W2 519 aaPredicted RBP17.12■□□□□ 0.33
CPSF4-209ENST00000465132 C2CD4AQ8NCU7 369 aaPredicted RBP17.12■□□□□ 0.33
CPSF4-209ENST00000465132 GPR156Q8NFN8 814 aa17.12■□□□□ 0.33
CPSF4-209ENST00000465132 MED8Q96G25 268 aa17.12■□□□□ 0.33
CPSF4-209ENST00000465132 CCNL2Q96S94 520 aaPredicted RBP17.12■□□□□ 0.33
CPSF4-209ENST00000465132 TIMM29Q9BSF4 260 aa17.12■□□□□ 0.33
CPSF4-209ENST00000465132 LRRN3Q9H3W5 708 aa17.12■□□□□ 0.33
CPSF4-209ENST00000465132 ATXN7L1Q9ULK2 861 aaPredicted RBP17.12■□□□□ 0.33
CPSF4-209ENST00000465132 TMEM98Q9Y2Y6 226 aa17.12■□□□□ 0.33
CPSF4-209ENST00000465132 C17orf113A0A1B0GUU1 675 aa17.11■□□□□ 0.33
CPSF4-209ENST00000465132 UBA6A0AVT1 1052 aaPredicted RBP17.11■□□□□ 0.33
CPSF4-209ENST00000465132 B8ZZF3 427 aa17.11■□□□□ 0.33
CPSF4-209ENST00000465132 EFSO43281 561 aa17.11■□□□□ 0.33
CPSF4-209ENST00000465132 ACSL3O95573 720 aa17.11■□□□□ 0.33
CPSF4-209ENST00000465132 SLC2A4P14672 509 aa17.11■□□□□ 0.33
CPSF4-209ENST00000465132 CCKBRP32239 447 aa17.11■□□□□ 0.33
CPSF4-209ENST00000465132 GNPDA1P46926 289 aa17.11■□□□□ 0.33
CPSF4-209ENST00000465132 TEDDM1Q5T9Z0 273 aa17.11■□□□□ 0.33
CPSF4-209ENST00000465132 LGSNQ5TDP6 509 aa17.11■□□□□ 0.33
CPSF4-209ENST00000465132 UGT3A1Q6NUS8 523 aa17.11■□□□□ 0.33
CPSF4-209ENST00000465132 TMEM220Q6QAJ8 160 aa17.11■□□□□ 0.33
CPSF4-209ENST00000465132 TRIM74Q86UV6 250 aa17.11■□□□□ 0.33
CPSF4-209ENST00000465132 CTAGE3PQ8IX95 158 aa17.11■□□□□ 0.33
CPSF4-209ENST00000465132 MYRIPQ8NFW9 859 aa17.11■□□□□ 0.33
CPSF4-209ENST00000465132 FBF1Q8TES7 1133 aa17.11■□□□□ 0.33
CPSF4-209ENST00000465132 OR1E3Q8WZA6 343 aa17.11■□□□□ 0.33
CPSF4-209ENST00000465132 CAVIN3Q969G5 261 aa17.11■□□□□ 0.33
CPSF4-209ENST00000465132 TMEM74Q96NL1 305 aa17.11■□□□□ 0.33
CPSF4-209ENST00000465132 CPNE1Q99829 537 aa17.11■□□□□ 0.33
CPSF4-209ENST00000465132 WDR83Q9BRX9 315 aaKnown RBP17.11■□□□□ 0.33
CPSF4-209ENST00000465132 FUT8Q9BYC5 575 aa17.11■□□□□ 0.33
CPSF4-209ENST00000465132 ACSS3Q9H6R3 686 aa17.11■□□□□ 0.33
CPSF4-209ENST00000465132 FGF22Q9HCT0 170 aa17.11■□□□□ 0.33
CPSF4-209ENST00000465132 ACSL6Q9UKU0 697 aa17.11■□□□□ 0.33
CPSF4-209ENST00000465132 SUFUQ9UMX1 484 aa17.11■□□□□ 0.33
CPSF4-209ENST00000465132 COL6A6A6NMZ7 2263 aa17.1■□□□□ 0.33
CPSF4-209ENST00000465132 CCDC151A5D8V7 595 aa17.1■□□□□ 0.33
CPSF4-209ENST00000465132 FAM159BA6NKW6 160 aa17.1■□□□□ 0.33
CPSF4-209ENST00000465132 GOLGA8KD6RF30 607 aa17.1■□□□□ 0.33
CPSF4-209ENST00000465132 GOLGA8TH3BQL2 631 aa17.1■□□□□ 0.33
CPSF4-209ENST00000465132 S1PR4O95977 384 aa17.1■□□□□ 0.33
CPSF4-209ENST00000465132 HGFP14210 728 aa17.1■□□□□ 0.33
CPSF4-209ENST00000465132 ZNF8P17098 575 aaPredicted RBP17.1■□□□□ 0.33
CPSF4-209ENST00000465132 SLC1A2P43004 574 aa17.1■□□□□ 0.33
CPSF4-209ENST00000465132 CD151P48509 253 aa17.1■□□□□ 0.33
CPSF4-209ENST00000465132 PRLHRP49683 370 aa17.1■□□□□ 0.33
CPSF4-209ENST00000465132 CSE1LP55060 971 aaKnown RBP17.1■□□□□ 0.33
CPSF4-209ENST00000465132 GPX6P59796 221 aa17.1■□□□□ 0.33
CPSF4-209ENST00000465132 TMED2Q15363 201 aa17.1■□□□□ 0.33
CPSF4-209ENST00000465132 INSCQ1MX18 579 aa17.1■□□□□ 0.33
CPSF4-209ENST00000465132 PYCR3Q53H96 274 aa17.1■□□□□ 0.33
CPSF4-209ENST00000465132 OGFOD3Q6PK18 319 aa17.1■□□□□ 0.33
CPSF4-209ENST00000465132 MARK2Q7KZI7 788 aaKnown RBP17.1■□□□□ 0.33
CPSF4-209ENST00000465132 TAF8Q7Z7C8 310 aa17.1■□□□□ 0.33
CPSF4-209ENST00000465132 AMZ2Q86W34 360 aa17.1■□□□□ 0.33
CPSF4-209ENST00000465132 RASGEF1AQ8N9B8 481 aa17.1■□□□□ 0.33
CPSF4-209ENST00000465132 UBLCP1Q8WVY7 318 aaPredicted RBP17.1■□□□□ 0.33
CPSF4-209ENST00000465132 LINC00615Q96LM1 132 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms