RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 SPTA1P02549 2419 aa25.21■■□□□ 1.63
U2AF1-206ENST00000464750 UBA6A0AVT1 1052 aaPredicted RBP25.2■■□□□ 1.62
U2AF1-206ENST00000464750 E7EVH7 732 aa25.2■■□□□ 1.62
U2AF1-206ENST00000464750 NKX2-8O15522 239 aa25.2■■□□□ 1.62
U2AF1-206ENST00000464750 SPAG6O75602 509 aa25.2■■□□□ 1.62
U2AF1-206ENST00000464750 GAS8O95995 478 aa25.2■■□□□ 1.62
U2AF1-206ENST00000464750 PRKAR1AP10644 381 aa25.2■■□□□ 1.62
U2AF1-206ENST00000464750 PSMA3P25788 255 aa25.2■■□□□ 1.62
U2AF1-206ENST00000464750 ARCN1P48444 511 aaKnown RBP25.2■■□□□ 1.62
U2AF1-206ENST00000464750 ARL4DP49703 201 aa25.2■■□□□ 1.62
U2AF1-206ENST00000464750 NFATC3Q12968 1075 aa25.2■■□□□ 1.62
U2AF1-206ENST00000464750 SKIDA1Q1XH10 827 aa25.2■■□□□ 1.62
U2AF1-206ENST00000464750 LARP7Q4G0J3 582 aaKnown RBP eCLIP25.2■■□□□ 1.62
U2AF1-206ENST00000464750 ZNF658BQ4V348 819 aaPredicted RBP25.2■■□□□ 1.62
U2AF1-206ENST00000464750 PRUNE1Q86TP1 453 aa25.2■■□□□ 1.62
U2AF1-206ENST00000464750 KMT5CQ86Y97 462 aa25.2■■□□□ 1.62
U2AF1-206ENST00000464750 STARD8Q92502 1023 aa25.2■■□□□ 1.62
U2AF1-206ENST00000464750 OR52A5Q9H2C5 316 aa25.2■■□□□ 1.62
U2AF1-206ENST00000464750 PDE7BQ9NP56 450 aa25.2■■□□□ 1.62
U2AF1-206ENST00000464750 LZTFL1Q9NQ48 299 aa25.2■■□□□ 1.62
U2AF1-206ENST00000464750 SMARCAL1Q9NZC9 954 aa25.2■■□□□ 1.62
U2AF1-206ENST00000464750 BOD1L1Q8NFC6 3051 aa25.2■■□□□ 1.62
U2AF1-206ENST00000464750 GOLGA6L3A6NEY3 463 aa25.19■■□□□ 1.62
U2AF1-206ENST00000464750 OR51F1A6NGY5 319 aa25.19■■□□□ 1.62
U2AF1-206ENST00000464750 IFRD1O00458 451 aaPredicted RBP25.19■■□□□ 1.62
U2AF1-206ENST00000464750 SUN1O94901 812 aa25.19■■□□□ 1.62
U2AF1-206ENST00000464750 EBLN1P0CF75 366 aa25.19■■□□□ 1.62
U2AF1-206ENST00000464750 ETS1P14921 441 aa25.19■■□□□ 1.62
U2AF1-206ENST00000464750 FOLR1P15328 257 aa25.19■■□□□ 1.62
U2AF1-206ENST00000464750 CDC20Q12834 499 aa25.19■■□□□ 1.62
U2AF1-206ENST00000464750 CERS6Q6ZMG9 384 aa25.19■■□□□ 1.62
U2AF1-206ENST00000464750 ACVR1CQ8NER5 493 aa25.19■■□□□ 1.62
U2AF1-206ENST00000464750 CATSPER2Q96P56 530 aa25.19■■□□□ 1.62
U2AF1-206ENST00000464750 RAB6BQ9NRW1 208 aa25.19■■□□□ 1.62
U2AF1-206ENST00000464750 RARRES3Q9UL19 164 aa25.19■■□□□ 1.62
U2AF1-206ENST00000464750 HEATR9A2RTY3 570 aa25.18■■□□□ 1.62
U2AF1-206ENST00000464750 CCDC162PA2VCL2 907 aa25.18■■□□□ 1.62
U2AF1-206ENST00000464750 AP2A2O94973 939 aa25.18■■□□□ 1.62
U2AF1-206ENST00000464750 TIAF1O95411 115 aa25.18■■□□□ 1.62
U2AF1-206ENST00000464750 CCDC175P0C221 793 aa25.18■■□□□ 1.62
U2AF1-206ENST00000464750 SFTPCP11686 197 aa25.18■■□□□ 1.62
U2AF1-206ENST00000464750 PDHA2P29803 388 aa25.18■■□□□ 1.62
U2AF1-206ENST00000464750 FOXN2P32314 431 aa25.18■■□□□ 1.62
U2AF1-206ENST00000464750 GRIA1P42261 906 aa25.18■■□□□ 1.62
U2AF1-206ENST00000464750 PREPP48147 710 aa25.18■■□□□ 1.62
U2AF1-206ENST00000464750 KPNA2P52292 529 aaKnown RBP25.18■■□□□ 1.62
U2AF1-206ENST00000464750 ACY1Q03154 408 aa25.18■■□□□ 1.62
U2AF1-206ENST00000464750 SEMA5AQ13591 1074 aa25.18■■□□□ 1.62
U2AF1-206ENST00000464750 ITIH4Q14624 930 aa25.18■■□□□ 1.62
U2AF1-206ENST00000464750 CCDC89Q8N998 374 aa25.18■■□□□ 1.62
U2AF1-206ENST00000464750 OR4E2Q8NGC2 313 aa25.18■■□□□ 1.62
U2AF1-206ENST00000464750 OR13J1Q8NGT2 312 aa25.18■■□□□ 1.62
U2AF1-206ENST00000464750 FERD3LQ96RJ6 166 aa25.18■■□□□ 1.62
U2AF1-206ENST00000464750 CROTQ9UKG9 612 aa25.18■■□□□ 1.62
U2AF1-206ENST00000464750 MRPS18BQ9Y676 258 aaKnown RBP25.18■■□□□ 1.62
U2AF1-206ENST00000464750 BSNQ9UPA5 3926 aa25.17■■□□□ 1.62
U2AF1-206ENST00000464750 GSTM1P09488 218 aa25.17■■□□□ 1.62
U2AF1-206ENST00000464750 ITGB6P18564 788 aa25.17■■□□□ 1.62
U2AF1-206ENST00000464750 POLR2CP19387 275 aaPredicted RBP25.17■■□□□ 1.62
U2AF1-206ENST00000464750 DLSTP36957 453 aa25.17■■□□□ 1.62
U2AF1-206ENST00000464750 NSG1P42857 185 aa25.17■■□□□ 1.62
U2AF1-206ENST00000464750 HSD11B2P80365 405 aa25.17■■□□□ 1.62
U2AF1-206ENST00000464750 GSTM4Q03013 218 aa25.17■■□□□ 1.62
U2AF1-206ENST00000464750 PRKAA1Q13131 559 aa25.17■■□□□ 1.62
U2AF1-206ENST00000464750 RPA4Q13156 261 aa25.17■■□□□ 1.62
U2AF1-206ENST00000464750 SIX1Q15475 284 aaPredicted RBP25.17■■□□□ 1.62
U2AF1-206ENST00000464750 ZNF449Q6P9G9 518 aa25.17■■□□□ 1.62
U2AF1-206ENST00000464750 GLIS1Q8NBF1 620 aa25.17■■□□□ 1.62
U2AF1-206ENST00000464750 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.17■■□□□ 1.62
U2AF1-206ENST00000464750 STARD5Q9NSY2 213 aa25.17■■□□□ 1.62
U2AF1-206ENST00000464750 PAK5Q9P286 719 aa25.17■■□□□ 1.62
U2AF1-206ENST00000464750 PRSS21Q9Y6M0 314 aa25.17■■□□□ 1.62
U2AF1-206ENST00000464750 ZBTB11O95625 1053 aaPredicted RBP25.16■■□□□ 1.62
U2AF1-206ENST00000464750 F8A1P23610 371 aa25.16■■□□□ 1.62
U2AF1-206ENST00000464750 OAS2P29728 719 aaKnown RBP25.16■■□□□ 1.62
U2AF1-206ENST00000464750 CD151P48509 253 aa25.16■■□□□ 1.62
U2AF1-206ENST00000464750 MC1RQ01726 317 aa25.16■■□□□ 1.62
U2AF1-206ENST00000464750 LAMB3Q13751 1172 aa25.16■■□□□ 1.62
U2AF1-206ENST00000464750 TSTD2Q5T7W7 516 aa25.16■■□□□ 1.62
U2AF1-206ENST00000464750 FBXO38Q6PIJ6 1188 aa25.16■■□□□ 1.62
U2AF1-206ENST00000464750 AFTPHQ6ULP2 937 aa25.16■■□□□ 1.62
U2AF1-206ENST00000464750 PACS1Q6VY07 963 aa25.16■■□□□ 1.62
U2AF1-206ENST00000464750 ZNF662Q6ZS27 426 aa25.16■■□□□ 1.62
U2AF1-206ENST00000464750 CARFQ8N187 725 aa25.16■■□□□ 1.62
U2AF1-206ENST00000464750 D2HGDHQ8N465 521 aa25.16■■□□□ 1.62
U2AF1-206ENST00000464750 LCN9Q8WX39 176 aa25.16■■□□□ 1.62
U2AF1-206ENST00000464750 PPM1MQ96MI6 270 aa25.16■■□□□ 1.62
U2AF1-206ENST00000464750 RANBP9Q96S59 729 aa25.16■■□□□ 1.62
U2AF1-206ENST00000464750 SRMSQ9H3Y6 488 aa25.16■■□□□ 1.62
U2AF1-206ENST00000464750 CASS4Q9NQ75 786 aa25.16■■□□□ 1.62
U2AF1-206ENST00000464750 FGF21Q9NSA1 209 aa25.16■■□□□ 1.62
U2AF1-206ENST00000464750 GEMIN8Q9NWZ8 242 aaKnown RBP25.16■■□□□ 1.62
U2AF1-206ENST00000464750 SLC2A6Q9UGQ3 507 aa25.16■■□□□ 1.62
U2AF1-206ENST00000464750 POMT2Q9UKY4 750 aa25.16■■□□□ 1.62
U2AF1-206ENST00000464750 QSOX1O00391 747 aa25.15■■□□□ 1.62
U2AF1-206ENST00000464750 GOT2P00505 430 aaKnown RBP25.15■■□□□ 1.62
U2AF1-206ENST00000464750 MT-ND3P03897 115 aa25.15■■□□□ 1.62
U2AF1-206ENST00000464750 APRTP07741 180 aa25.15■■□□□ 1.62
U2AF1-206ENST00000464750 ZSCAN5DPP0CG00 497 aa25.15■■□□□ 1.62
U2AF1-206ENST00000464750 TCN2P20062 427 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms