RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 WRAP53Q9BUR4 548 aaKnown RBP8.94□□□□□ -0.98
HPS4-208ENST00000464362 RBM4Q9BWF3 364 aaKnown RBP8.94□□□□□ -0.98
HPS4-208ENST00000464362 NFKBIZQ9BYH8 718 aa8.94□□□□□ -0.98
HPS4-208ENST00000464362 MAGEH1Q9H213 219 aa8.94□□□□□ -0.98
HPS4-208ENST00000464362 NUP214P35658 2090 aaPredicted RBP8.94□□□□□ -0.98
HPS4-208ENST00000464362 AQP12BA6NM10 295 aa8.94□□□□□ -0.98
HPS4-208ENST00000464362 GABRDO14764 452 aa8.94□□□□□ -0.98
HPS4-208ENST00000464362 MAGEB3O15480 346 aa8.94□□□□□ -0.98
HPS4-208ENST00000464362 XPNPEP2O43895 674 aa8.94□□□□□ -0.98
HPS4-208ENST00000464362 RPLP2P05387 115 aaKnown RBP8.94□□□□□ -0.98
HPS4-208ENST00000464362 GPR1P46091 355 aa8.94□□□□□ -0.98
HPS4-208ENST00000464362 SRP54P61011 504 aaKnown RBP8.94□□□□□ -0.98
HPS4-208ENST00000464362 TOP3AQ13472 1001 aaPredicted RBP8.94□□□□□ -0.98
HPS4-208ENST00000464362 DAG1Q14118 895 aa8.94□□□□□ -0.98
HPS4-208ENST00000464362 HERC3Q15034 1050 aa8.94□□□□□ -0.98
HPS4-208ENST00000464362 UAP1L1Q3KQV9 507 aa8.94□□□□□ -0.98
HPS4-208ENST00000464362 ZNF678Q5SXM1 525 aa8.94□□□□□ -0.98
HPS4-208ENST00000464362 AGMOQ6ZNB7 445 aa8.94□□□□□ -0.98
HPS4-208ENST00000464362 P2RY8Q86VZ1 359 aa8.94□□□□□ -0.98
HPS4-208ENST00000464362 HID1Q8IV36 788 aa8.94□□□□□ -0.98
HPS4-208ENST00000464362 AQP12AQ8IXF9 295 aa8.94□□□□□ -0.98
HPS4-208ENST00000464362 FIBCD1Q8N539 461 aa8.94□□□□□ -0.98
HPS4-208ENST00000464362 OR4A15Q8NGL6 344 aa8.94□□□□□ -0.98
HPS4-208ENST00000464362 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.94□□□□□ -0.98
HPS4-208ENST00000464362 TLE6Q9H808 572 aa8.94□□□□□ -0.98
HPS4-208ENST00000464362 TMEM39AQ9NV64 488 aa8.94□□□□□ -0.98
HPS4-208ENST00000464362 TBC1D3BA6NDS4 549 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 PTGESO14684 152 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 SNPHO15079 494 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 GRID2O43424 1007 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 NR2F1P10589 423 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 IL12AP29459 219 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 GATMP50440 423 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 CACNG1Q06432 222 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 PABPC1LQ4VXU2 614 aaKnown RBP8.93□□□□□ -0.98
HPS4-208ENST00000464362 FNDC3BQ53EP0 1204 aaKnown RBP8.93□□□□□ -0.98
HPS4-208ENST00000464362 TECRLQ5HYJ1 363 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 INTS11Q5TA45 600 aaKnown RBP8.93□□□□□ -0.98
HPS4-208ENST00000464362 OR4F3Q6IEY1 312 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 GALNT10Q86SR1 603 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 SLC15A3Q8IY34 581 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 AADATQ8N5Z0 425 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 TTC29Q8NA56 475 aaPredicted RBP8.93□□□□□ -0.98
HPS4-208ENST00000464362 KDM1BQ8NB78 822 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 C2CD4AQ8NCU7 369 aaPredicted RBP8.93□□□□□ -0.98
HPS4-208ENST00000464362 COX4I2Q96KJ9 171 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 DEPDC7Q96QD5 511 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 SMIM14Q96QK8 99 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 TFB2MQ9H5Q4 396 aaKnown RBP8.93□□□□□ -0.98
HPS4-208ENST00000464362 EQTNQ9NQ60 294 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 AHSPQ9NZD4 102 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 TLR6Q9Y2C9 796 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 UBR2Q8IWV8 1755 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 TJP1Q07157 1748 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 A0A1W2PP18 115 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 CAPN14A8MX76 684 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 ONECUT3O60422 494 aaPredicted RBP8.93□□□□□ -0.98
HPS4-208ENST00000464362 NDUFS2O75306 463 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 CLDN7O95471 211 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 ESR1P03372 595 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 PABPC4LP0CB38 370 aaKnown RBP8.93□□□□□ -0.98
HPS4-208ENST00000464362 RAP2AP10114 183 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 BUD31P41223 144 aaPredicted RBP8.93□□□□□ -0.98
HPS4-208ENST00000464362 HCAR3P49019 387 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 CBX3Q13185 183 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 ZNF846Q147U1 533 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 ZNF792Q3KQV3 632 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 TXNDC8Q6A555 127 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 ELMSAN1Q6PJG2 1045 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 PTCHD4Q6ZW05 846 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 SMG8Q8ND04 991 aaKnown RBP8.93□□□□□ -0.98
HPS4-208ENST00000464362 OR52B6Q8NGF0 335 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 IGSF8Q969P0 613 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 SYT17Q9BSW7 474 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 DHRS4Q9BTZ2 278 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 ITM2CQ9NQX7 267 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 DNAJC11Q9NVH1 559 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 TMLHEQ9NVH6 421 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 C1orf109Q9NX04 203 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 SAMD4AQ9UPU9 718 aaKnown RBP8.93□□□□□ -0.98
HPS4-208ENST00000464362 NRAPQ86VF7 1730 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 FAM234BA2RU67 622 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 LOC730098B7Z3J9 87 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 CLDN25C9JDP6 229 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 KERAO60938 352 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 ITGB1P05556 798 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 ZBTB48P10074 688 aaPredicted RBP8.93□□□□□ -0.98
HPS4-208ENST00000464362 WASP42768 502 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 PTGER3P43115 390 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 TPTEP56180 551 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 KLHL17Q6TDP4 642 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 TRIM48Q8IWZ4 208 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 TTC9BQ8N6N2 239 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 FBXO22Q8NEZ5 403 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 WDR36Q8NI36 951 aaKnown RBP8.93□□□□□ -0.98
HPS4-208ENST00000464362 GATA6Q92908 595 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 CLP1Q92989 425 aaKnown RBP8.93□□□□□ -0.98
HPS4-208ENST00000464362 PPCDCQ96CD2 204 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 ZNF558Q96NG5 402 aa8.93□□□□□ -0.98
HPS4-208ENST00000464362 PTPN18Q99952 460 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms