RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 KIAA1191Q96A73 305 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 TMCO6Q96DC7 493 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 YIPF6Q96EC8 236 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 ZHX1-C8orf76Q96EF9 292 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 PHF21BQ96EK2 531 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 PPP3R2Q96LZ3 170 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 TEPSINQ96N21 525 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 ZNF599Q96NL3 588 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 SEPHS2Q99611 448 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 APOL2Q9BQE5 337 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 FDXACB1Q9BRP7 624 aaPredicted RBP7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 CCDC32Q9BV29 185 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 COLEC11Q9BWP8 271 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 DGCR6LQ9BY27 220 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 DERL2Q9GZP9 239 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 NAA50Q9GZZ1 169 aaKnown RBP7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 GABARAPL1Q9H0R8 117 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 DSN1Q9H410 356 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 ALG9Q9H6U8 611 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 HEBP1Q9NRV9 189 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 PIGVQ9NUD9 493 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 DDIT4Q9NX09 232 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 SMPD4Q9NXE4 827 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 CCDC59Q9P031 241 aaKnown RBP7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 CRNNQ9UBG3 495 aaPredicted RBP7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 OR12D3Q9UGF7 316 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 ZNF221Q9UK13 617 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 EIF3LQ9Y262 564 aaKnown RBP7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 BTRCQ9Y297 605 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 CARD8Q9Y2G2 431 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 MFHAS1Q9Y4C4 1052 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 HES2Q9Y543 173 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 TNPO3Q9Y5L0 923 aaKnown RBP7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 OAS3Q9Y6K5 1087 aaKnown RBP7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 MICAL3Q7RTP6 2002 aa7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 ZFC3H1O60293 1989 aaKnown RBP7.09□□□□□ -1.27
CLSTN1-204ENST00000464286 SHROOM3Q8TF72 1996 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 SYNJ2BP-COX16A0A087WUM0 186 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 RRN3P2A6NIE6 340 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 TNFRSF10BO14763 440 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 KMOO15229 486 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 FOXD2O60548 495 aaPredicted RBP7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 CDK14O94921 469 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 DLGAP3O95886 979 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 IL6P05231 212 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 SLC2A3P11169 496 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 CD1DP15813 335 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 CD9P21926 228 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 PTX3P26022 381 aaPredicted RBP7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 HTR1BP28222 390 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 ELK4P28324 431 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 EIF2DP41214 584 aaKnown RBP7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 CASP2P42575 452 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 ALDH7A1P49419 539 aaKnown RBP7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 CLCN3P51790 818 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 ATXN1P54253 815 aaKnown RBP7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 CDH13P55290 713 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 DAOAP59103 153 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 PURAQ00577 322 aaKnown RBP7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 IL5RAQ01344 420 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 NRG1Q02297 640 aaPredicted RBP7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 ELP6Q0PNE2 266 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 CAPRIN1Q14444 709 aaKnown RBP7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 PITRM1Q5JRX3 1037 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 SPANXN2Q5MJ10 180 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 RSBN1Q5VWQ0 802 aaPredicted RBP7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 ATG9BQ674R7 924 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 SYCE2Q6PIF2 218 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 XKRXQ6PP77 449 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 LBX2Q6XYB7 198 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 RNF165Q6ZSG1 346 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 GPRIN3Q6ZVF9 776 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 TAS2R42Q7RTR8 314 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 LIMS2Q7Z4I7 341 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 TRIM69Q86WT6 500 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 KRT73Q86Y46 540 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 PHYKPLQ8IUZ5 450 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 CCDC103Q8IW40 242 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 FAM126BQ8IXS8 530 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 LINC01465Q8N7H1 131 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 ACVR1CQ8NER5 493 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 FLCNQ8NFG4 579 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 ST13P5Q8NFI4 369 aaPredicted RBP7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 OR6P1Q8NGX9 317 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 DNAJB14Q8TBM8 379 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 DYNC2LI1Q8TCX1 351 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 MCOLN3Q8TDD5 553 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 CLEC4CQ8WTT0 213 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 CLP1Q92989 425 aaKnown RBP7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 FAM162AQ96A26 154 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 SLC47A1Q96FL8 570 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 SLC39A3Q9BRY0 314 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 C17orf80Q9BSJ5 609 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 HOXD1Q9GZZ0 328 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 RACGAP1Q9H0H5 632 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 DUSP21Q9H596 190 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 SLA2Q9H6Q3 261 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 SYNDIG1Q9H7V2 258 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 ACTR8Q9H981 624 aa7.08□□□□□ -1.28
CLSTN1-204ENST00000464286 SIAEQ9HAT2 523 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms