RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 PRSS44E7EML9 344 aa14.05□□□□□ -0.16
SMC1A-204ENST00000463684 KLF7O75840 302 aaPredicted RBP14.05□□□□□ -0.16
SMC1A-204ENST00000463684 CYP1A2P05177 515 aa14.05□□□□□ -0.16
SMC1A-204ENST00000463684 MSH3P20585 1137 aa14.05□□□□□ -0.16
SMC1A-204ENST00000463684 GRNP28799 593 aaKnown RBP14.05□□□□□ -0.16
SMC1A-204ENST00000463684 PRDX3P30048 256 aaKnown RBP14.05□□□□□ -0.16
SMC1A-204ENST00000463684 FOLR3P41439 243 aa14.05□□□□□ -0.16
SMC1A-204ENST00000463684 TNNT3P45378 269 aaPredicted RBP14.05□□□□□ -0.16
SMC1A-204ENST00000463684 ITGA9Q13797 1035 aa14.05□□□□□ -0.16
SMC1A-204ENST00000463684 SLC14A2Q15849 920 aa14.05□□□□□ -0.16
SMC1A-204ENST00000463684 ZNF789Q5FWF6 425 aa14.05□□□□□ -0.16
SMC1A-204ENST00000463684 FAM182AQ5T1J6 154 aa14.05□□□□□ -0.16
SMC1A-204ENST00000463684 GPRC6AQ5T6X5 926 aa14.05□□□□□ -0.16
SMC1A-204ENST00000463684 FAM151BQ6UXP7 276 aa14.05□□□□□ -0.16
SMC1A-204ENST00000463684 SPOCD1Q6ZMY3 1216 aa14.05□□□□□ -0.16
SMC1A-204ENST00000463684 B4GALNT4Q76KP1 1039 aa14.05□□□□□ -0.16
SMC1A-204ENST00000463684 SPDYE1Q8NFV5 336 aaPredicted RBP14.05□□□□□ -0.16
SMC1A-204ENST00000463684 SPATA22Q8NHS9 363 aa14.05□□□□□ -0.16
SMC1A-204ENST00000463684 TADA1Q96BN2 335 aa14.05□□□□□ -0.16
SMC1A-204ENST00000463684 ATP13A2Q9NQ11 1180 aa14.05□□□□□ -0.16
SMC1A-204ENST00000463684 RTN4Q9NQC3 1192 aaKnown RBP14.05□□□□□ -0.16
SMC1A-204ENST00000463684 P4HTMQ9NXG6 502 aa14.05□□□□□ -0.16
SMC1A-204ENST00000463684 FAM8A1Q9UBU6 413 aa14.05□□□□□ -0.16
SMC1A-204ENST00000463684 PTRH2Q9Y3E5 179 aaKnown RBP14.05□□□□□ -0.16
SMC1A-204ENST00000463684 HEBP2Q9Y5Z4 205 aa14.05□□□□□ -0.16
SMC1A-204ENST00000463684 OTOGQ6ZRI0 2925 aa14.05□□□□□ -0.16
SMC1A-204ENST00000463684 GLYATL1P3A0A0U1RQE8 302 aa14.04□□□□□ -0.16
SMC1A-204ENST00000463684 A0A1B0GUH1 482 aa14.04□□□□□ -0.16
SMC1A-204ENST00000463684 ZG16O60844 167 aa14.04□□□□□ -0.16
SMC1A-204ENST00000463684 PMPCBO75439 489 aa14.04□□□□□ -0.16
SMC1A-204ENST00000463684 KRT38O76015 456 aa14.04□□□□□ -0.16
SMC1A-204ENST00000463684 MT-CYBP00156 380 aaPredicted RBP14.04□□□□□ -0.16
SMC1A-204ENST00000463684 PYGMP11217 842 aa14.04□□□□□ -0.16
SMC1A-204ENST00000463684 ITGA3P26006 1051 aa14.04□□□□□ -0.16
SMC1A-204ENST00000463684 AKT1P31749 480 aa14.04□□□□□ -0.16
SMC1A-204ENST00000463684 LMAN1P49257 510 aa14.04□□□□□ -0.16
SMC1A-204ENST00000463684 SOX8P57073 446 aa14.04□□□□□ -0.16
SMC1A-204ENST00000463684 PDK1Q15118 436 aa14.04□□□□□ -0.16
SMC1A-204ENST00000463684 STX1AQ16623 288 aa14.04□□□□□ -0.16
SMC1A-204ENST00000463684 CYP2A13Q16696 494 aa14.04□□□□□ -0.16
SMC1A-204ENST00000463684 FILIP1LQ4L180 1135 aa14.04□□□□□ -0.16
SMC1A-204ENST00000463684 DET1Q7L5Y6 550 aa14.04□□□□□ -0.16
SMC1A-204ENST00000463684 ACVR1CQ8NER5 493 aa14.04□□□□□ -0.16
SMC1A-204ENST00000463684 OR2L2Q8NH16 312 aa14.04□□□□□ -0.16
SMC1A-204ENST00000463684 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.04□□□□□ -0.16
SMC1A-204ENST00000463684 LCN9Q8WX39 176 aa14.04□□□□□ -0.16
SMC1A-204ENST00000463684 PTERQ96BW5 349 aa14.04□□□□□ -0.16
SMC1A-204ENST00000463684 RNF157Q96PX1 679 aa14.04□□□□□ -0.16
SMC1A-204ENST00000463684 WDR77Q9BQA1 342 aaPredicted RBP14.04□□□□□ -0.16
SMC1A-204ENST00000463684 GLOD4Q9HC38 313 aa14.04□□□□□ -0.16
SMC1A-204ENST00000463684 ZBTB20Q9HC78 741 aaPredicted RBP14.04□□□□□ -0.16
SMC1A-204ENST00000463684 CHMP5Q9NZZ3 219 aa14.04□□□□□ -0.16
SMC1A-204ENST00000463684 NDOR1Q9UHB4 597 aa14.04□□□□□ -0.16
SMC1A-204ENST00000463684 PKP3Q9Y446 797 aa14.04□□□□□ -0.16
SMC1A-204ENST00000463684 BZW2Q9Y6E2 419 aaKnown RBP14.04□□□□□ -0.16
SMC1A-204ENST00000463684 POLBP06746 335 aa14.03□□□□□ -0.16
SMC1A-204ENST00000463684 ATXN8OSP0DMR3 200 aa14.03□□□□□ -0.16
SMC1A-204ENST00000463684 EDN3P14138 238 aa14.03□□□□□ -0.16
SMC1A-204ENST00000463684 ST6GAL1P15907 406 aa14.03□□□□□ -0.16
SMC1A-204ENST00000463684 KDELR1P24390 212 aa14.03□□□□□ -0.16
SMC1A-204ENST00000463684 DCDP81605 110 aaKnown RBP14.03□□□□□ -0.16
SMC1A-204ENST00000463684 NFKBIBQ15653 356 aa14.03□□□□□ -0.16
SMC1A-204ENST00000463684 ZXDCQ2QGD7 858 aaPredicted RBP14.03□□□□□ -0.16
SMC1A-204ENST00000463684 ANO6Q4KMQ2 910 aa14.03□□□□□ -0.16
SMC1A-204ENST00000463684 ZNF385CQ66K41 422 aaPredicted RBP14.03□□□□□ -0.16
SMC1A-204ENST00000463684 ZC3H18Q86VM9 953 aaKnown RBP14.03□□□□□ -0.16
SMC1A-204ENST00000463684 HOOK3Q86VS8 718 aa14.03□□□□□ -0.16
SMC1A-204ENST00000463684 CFAP206Q8IYR0 622 aa14.03□□□□□ -0.16
SMC1A-204ENST00000463684 DNAJB14Q8TBM8 379 aa14.03□□□□□ -0.16
SMC1A-204ENST00000463684 GRHL3Q8TE85 626 aa14.03□□□□□ -0.16
SMC1A-204ENST00000463684 COG1Q8WTW3 980 aa14.03□□□□□ -0.16
SMC1A-204ENST00000463684 GBP5Q96PP8 586 aa14.03□□□□□ -0.16
SMC1A-204ENST00000463684 TRAPPC9Q96Q05 1148 aa14.03□□□□□ -0.16
SMC1A-204ENST00000463684 FERD3LQ96RJ6 166 aa14.03□□□□□ -0.16
SMC1A-204ENST00000463684 CCM2Q9BSQ5 444 aa14.03□□□□□ -0.16
SMC1A-204ENST00000463684 MAK16Q9BXY0 300 aaKnown RBP14.03□□□□□ -0.16
SMC1A-204ENST00000463684 HSD3B7Q9H2F3 369 aa14.03□□□□□ -0.16
SMC1A-204ENST00000463684 UBP1Q9NZI7 540 aa14.03□□□□□ -0.16
SMC1A-204ENST00000463684 HACD3Q9P035 362 aa14.03□□□□□ -0.16
SMC1A-204ENST00000463684 IL17CQ9P0M4 197 aa14.03□□□□□ -0.16
SMC1A-204ENST00000463684 IFT80Q9P2H3 777 aaPredicted RBP14.03□□□□□ -0.16
SMC1A-204ENST00000463684 COPG2Q9UBF2 871 aa14.03□□□□□ -0.16
SMC1A-204ENST00000463684 NOVA2Q9UNW9 492 aaKnown RBP14.03□□□□□ -0.16
SMC1A-204ENST00000463684 AP1M2Q9Y6Q5 423 aa14.03□□□□□ -0.16
SMC1A-204ENST00000463684 A0A0A6YYK5 440 aaPredicted RBP14.02□□□□□ -0.17
SMC1A-204ENST00000463684 PPP1R12AO14974 1030 aaPredicted RBP14.02□□□□□ -0.17
SMC1A-204ENST00000463684 GPR39O43194 453 aa14.02□□□□□ -0.17
SMC1A-204ENST00000463684 PROSCO94903 275 aa14.02□□□□□ -0.17
SMC1A-204ENST00000463684 CBSLP0DN79 551 aa14.02□□□□□ -0.17
SMC1A-204ENST00000463684 CBSP35520 551 aa14.02□□□□□ -0.17
SMC1A-204ENST00000463684 TAS2R40P59535 323 aa14.02□□□□□ -0.17
SMC1A-204ENST00000463684 AIMP2Q13155 320 aaKnown RBP14.02□□□□□ -0.17
SMC1A-204ENST00000463684 TEX44Q53QW1 395 aa14.02□□□□□ -0.17
SMC1A-204ENST00000463684 C1orf189Q5VU69 101 aa14.02□□□□□ -0.17
SMC1A-204ENST00000463684 RBM43Q6ZSC3 357 aaKnown RBP14.02□□□□□ -0.17
SMC1A-204ENST00000463684 CDHR3Q6ZTQ4 885 aa14.02□□□□□ -0.17
SMC1A-204ENST00000463684 GLT6D1Q7Z4J2 308 aa14.02□□□□□ -0.17
SMC1A-204ENST00000463684 PLD5Q8N7P1 536 aa14.02□□□□□ -0.17
SMC1A-204ENST00000463684 OR2Y1Q8NGV0 311 aa14.02□□□□□ -0.17
SMC1A-204ENST00000463684 ZNF398Q8TD17 642 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms