RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 AP1G1O43747 822 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 LRP3O75074 770 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 NDUFS3O75489 264 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 GJB3O75712 270 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 CDK14O94921 469 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 C8BP07358 591 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 LYNP07948 512 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 RPS17P08708 135 aaKnown RBP9.75□□□□□ -0.85
PTPRD-207ENST00000463477 PEX2P28328 305 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 RGRP47804 291 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 STX1BP61266 288 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 MED21Q13503 144 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 TRIM25Q14258 630 aaKnown RBP9.75□□□□□ -0.85
PTPRD-207ENST00000463477 OR4D1Q15615 310 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 TRIP10Q15642 601 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 LPAL2Q16609 132 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 SETMARQ53H47 684 aaPredicted RBP9.75□□□□□ -0.85
PTPRD-207ENST00000463477 SFT2D3Q587I9 215 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 AARS2Q5JTZ9 985 aaKnown RBP9.75□□□□□ -0.85
PTPRD-207ENST00000463477 C9orf64Q5T6V5 341 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 REP15Q6BDI9 236 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 OGFOD2Q6N063 350 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 GK5Q6ZS86 529 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 CHCHD4Q8N4Q1 142 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 ZNF366Q8N895 744 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 OR4K2Q8NGD2 314 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 SPDL1Q96EA4 605 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 RPL10LQ96L21 214 aaKnown RBP9.75□□□□□ -0.85
PTPRD-207ENST00000463477 NSMCE3Q96MG7 304 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 TRAPPC9Q96Q05 1148 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 NPAS2Q99743 824 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 C2orf49Q9BVC5 232 aaPredicted RBP9.75□□□□□ -0.85
PTPRD-207ENST00000463477 FAM192AQ9GZU8 254 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 MUC3BQ9H195 1237 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 USP36Q9P275 1121 aaKnown RBP9.75□□□□□ -0.85
PTPRD-207ENST00000463477 NCDNQ9UBB6 729 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 RIMS3Q9UJD0 308 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 GMEB2Q9UKD1 530 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 G3BP2Q9UN86 482 aaKnown RBP9.75□□□□□ -0.85
PTPRD-207ENST00000463477 HS3ST2Q9Y278 367 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 INVSQ9Y283 1065 aa9.75□□□□□ -0.85
PTPRD-207ENST00000463477 IGHV1OR15-9A0A0B4J2B8 117 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 EDDM13A0A1B0GTR0 161 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 TTC34A8MYJ7 566 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 ANKRD66B4E2M5 251 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 UBXN8O00124 270 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 MAP3K13O43283 966 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 DENRO43583 198 aaKnown RBP9.74□□□□□ -0.85
PTPRD-207ENST00000463477 NRP2O60462 931 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 VPS26AO75436 327 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 SRP72O76094 671 aaKnown RBP9.74□□□□□ -0.85
PTPRD-207ENST00000463477 IGLV3-19P01714 112 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 SLC4A1P02730 911 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 PKMP14618 531 aaKnown RBP9.74□□□□□ -0.85
PTPRD-207ENST00000463477 BCKDHBP21953 392 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 GPX3P22352 226 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 TGM1P22735 817 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 HSPA13P48723 471 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 SCNN1BP51168 640 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 SH3BP2P78314 561 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 ARF5P84085 180 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 MS4A2Q01362 244 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 LCP2Q13094 533 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 PTPRCAPQ14761 206 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 AGKQ53H12 422 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 SAMD4BQ5PRF9 694 aaKnown RBP9.74□□□□□ -0.85
PTPRD-207ENST00000463477 PMS2CLQ68D20 193 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 ANKS6Q68DC2 871 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 PRMT9Q6P2P2 845 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 NCEH1Q6PIU2 408 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 SLC36A4Q6YBV0 504 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 PHYKPLQ8IUZ5 450 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 HOMEZQ8IX15 550 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 STK40Q8N2I9 435 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 TTC30BQ8N4P2 665 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 FRMD1Q8N878 549 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 DCAF4L2Q8NA75 395 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 PCYOX1LQ8NBM8 494 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 ICA1LQ8NDH6 482 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 FRS2Q8WU20 508 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 RMDN1Q96DB5 314 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 ERLEC1Q96DZ1 483 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 PDLIM5Q96HC4 596 aaKnown RBP9.74□□□□□ -0.85
PTPRD-207ENST00000463477 MARK4Q96L34 752 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 BIRC8Q96P09 236 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 CCT7Q99832 543 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 SPON2Q9BUD6 331 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 SLC6A17Q9H1V8 727 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 RSPH9Q9H1X1 276 aaPredicted RBP9.74□□□□□ -0.85
PTPRD-207ENST00000463477 SPAG4Q9NPE6 437 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 PFDN4Q9NQP4 134 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 WSB2Q9NYS7 404 aaPredicted RBP9.74□□□□□ -0.85
PTPRD-207ENST00000463477 TMEM181Q9P2C4 612 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 CD300AQ9UGN4 299 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 MBD1Q9UIS9 605 aaPredicted RBP9.74□□□□□ -0.85
PTPRD-207ENST00000463477 SLC25A13Q9UJS0 675 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 RAB26Q9ULW5 256 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 SCML1Q9UN30 329 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 NDUFAF1Q9Y375 327 aa9.74□□□□□ -0.85
PTPRD-207ENST00000463477 DTNAQ9Y4J8 743 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms