RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 TMEM236Q5W0B7 351 aa15.58■□□□□ 0.08
SMC4-204ENST00000462787 MRPS31Q92665 395 aaKnown RBP15.58■□□□□ 0.08
SMC4-204ENST00000462787 CLP1Q92989 425 aaKnown RBP15.58■□□□□ 0.08
SMC4-204ENST00000462787 COG8Q96MW5 612 aa15.58■□□□□ 0.08
SMC4-204ENST00000462787 PAK1IP1Q9NWT1 392 aaPredicted RBP15.58■□□□□ 0.08
SMC4-204ENST00000462787 EIF3KQ9UBQ5 218 aaKnown RBP15.58■□□□□ 0.08
SMC4-204ENST00000462787 PCDHB7Q9Y5E2 793 aa15.58■□□□□ 0.08
SMC4-204ENST00000462787 RHOQP17081 205 aa15.58■□□□□ 0.08
SMC4-204ENST00000462787 RABL3Q5HYI8 236 aa15.58■□□□□ 0.08
SMC4-204ENST00000462787 CLIP4Q8N3C7 705 aa15.58■□□□□ 0.08
SMC4-204ENST00000462787 KCTD7Q96MP8 289 aa15.58■□□□□ 0.08
SMC4-204ENST00000462787 RNF19AQ9NV58 838 aa15.58■□□□□ 0.08
SMC4-204ENST00000462787 DNAJC11Q9NVH1 559 aa15.58■□□□□ 0.08
SMC4-204ENST00000462787 SLIT2O94813 1529 aa15.58■□□□□ 0.08
SMC4-204ENST00000462787 IRF6O14896 467 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 GJB1P08034 283 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 TNNI3P19429 210 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 VARSP26640 1264 aaKnown RBP15.57■□□□□ 0.08
SMC4-204ENST00000462787 HSPA7P48741 367 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 ZNF772Q68DY9 489 aaPredicted RBP15.57■□□□□ 0.08
SMC4-204ENST00000462787 PQLC3Q8N755 202 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 KANSL3Q9P2N6 904 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 COMMD3Q9UBI1 195 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 SOCS2O14508 198 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 AP3D1O14617 1153 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 RPN2P04844 631 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 FBXO48Q5FWF7 155 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 CHST15Q7LFX5 561 aaPredicted RBP15.57■□□□□ 0.08
SMC4-204ENST00000462787 SLITRK4Q8IW52 837 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 ZNF655Q8N720 491 aaPredicted RBP15.57■□□□□ 0.08
SMC4-204ENST00000462787 OR10G2Q8NGC3 310 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 FAIM2Q9BWQ8 316 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 AMBNQ9NP70 447 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 RAD18Q9NS91 495 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 KCTD5Q9NXV2 234 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 MLXQ9UH92 298 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 POFUT2Q9Y2G5 429 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 HSPB11Q9Y547 144 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 WNT10BO00744 389 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 HOXC6P09630 235 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 HNRNPFP52597 415 aaKnown RBP15.57■□□□□ 0.08
SMC4-204ENST00000462787 ATXN1P54253 815 aaKnown RBP15.57■□□□□ 0.08
SMC4-204ENST00000462787 UBE2R2Q712K3 238 aaPredicted RBP15.57■□□□□ 0.08
SMC4-204ENST00000462787 ABHD11Q8NFV4 315 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 NDRG1Q92597 394 aaKnown RBP15.57■□□□□ 0.08
SMC4-204ENST00000462787 GTPBP3Q969Y2 492 aaKnown RBP15.57■□□□□ 0.08
SMC4-204ENST00000462787 CAPN10Q9HC96 672 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 POLE4Q9NR33 117 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 COL20A1Q9P218 1284 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 KRBA1A5PL33 1030 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 CCNDBP1O95273 360 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 PTTG1O95997 202 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 RXRBP28702 533 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 RPL9P32969 192 aaKnown RBP15.57■□□□□ 0.08
SMC4-204ENST00000462787 KHDRBS2Q5VWX1 349 aaKnown RBP15.57■□□□□ 0.08
SMC4-204ENST00000462787 MOSPD2Q8NHP6 518 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 RFKQ969G6 155 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 FUNDC2Q9BWH2 189 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 KIF1AQ12756 1690 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 LMO7Q8WWI1 1683 aa15.57■□□□□ 0.08
SMC4-204ENST00000462787 CYP2B6P20813 491 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 RFC2P35250 354 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 HCAR3P49019 387 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 DSC2Q02487 901 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 AKIRIN2Q53H80 203 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 KIAA1614Q5VZ46 1190 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 CCBE1Q6UXH8 406 aaPredicted RBP15.56■□□□□ 0.08
SMC4-204ENST00000462787 FAM220AQ7Z4H9 259 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 PYURFQ96I23 114 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 C2orf49Q9BVC5 232 aaPredicted RBP15.56■□□□□ 0.08
SMC4-204ENST00000462787 ZNF717Q9BY31 904 aaPredicted RBP15.56■□□□□ 0.08
SMC4-204ENST00000462787 MFSD1Q9H3U5 465 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 NR2E3Q9Y5X4 410 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 GPR25O00155 361 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 SLC28A2O43868 658 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 KERAO60938 352 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 ECDO95905 644 aaPredicted RBP15.56■□□□□ 0.08
SMC4-204ENST00000462787 CKMP06732 381 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 DARSP14868 501 aaKnown RBP15.56■□□□□ 0.08
SMC4-204ENST00000462787 ATP5C1P36542 298 aaKnown RBP15.56■□□□□ 0.08
SMC4-204ENST00000462787 YBEYP58557 167 aaPredicted RBP15.56■□□□□ 0.08
SMC4-204ENST00000462787 KCNAB2Q13303 367 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 ANKRD46Q86W74 232 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 ZDHHC14Q8IZN3 488 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 HJURPQ8NCD3 748 aaPredicted RBP15.56■□□□□ 0.08
SMC4-204ENST00000462787 SLC38A4Q969I6 547 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 COPS8Q99627 209 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 HTATIP2Q9BUP3 242 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 SEZ6LQ9BYH1 1024 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 NFKBIZQ9BYH8 718 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 SCAMP3O14828 347 aaKnown RBP15.56■□□□□ 0.08
SMC4-204ENST00000462787 XPNPEP2O43895 674 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 OR5F1O95221 314 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 CCNYL3P0C7X3 344 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 MYCLP1P12525 358 aaPredicted RBP15.56■□□□□ 0.08
SMC4-204ENST00000462787 MFSD10Q14728 455 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 FAM20CQ8IXL6 584 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 MINDY1Q8N5J2 469 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 PDZD7Q9H5P4 517 aa15.56■□□□□ 0.08
SMC4-204ENST00000462787 SMURF2Q9HAU4 748 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms