RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 LRRN4CLQ8ND94 238 aa11.4□□□□□ -0.58
TRAF3IP1-204ENST00000462122 LKAAEAR1Q8TD35 194 aa11.4□□□□□ -0.58
TRAF3IP1-204ENST00000462122 ZFPM2Q8WW38 1151 aa11.4□□□□□ -0.58
TRAF3IP1-204ENST00000462122 C9orf72Q96LT7 481 aa11.4□□□□□ -0.58
TRAF3IP1-204ENST00000462122 RMDN2Q96LZ7 410 aa11.4□□□□□ -0.58
TRAF3IP1-204ENST00000462122 C12orf66Q96MD2 445 aa11.4□□□□□ -0.58
TRAF3IP1-204ENST00000462122 INSM2Q96T92 566 aaPredicted RBP11.4□□□□□ -0.58
TRAF3IP1-204ENST00000462122 LRRN3Q9H3W5 708 aa11.4□□□□□ -0.58
TRAF3IP1-204ENST00000462122 EPB41L1Q9H4G0 881 aa11.4□□□□□ -0.58
TRAF3IP1-204ENST00000462122 SLC40A1Q9NP59 571 aa11.4□□□□□ -0.58
TRAF3IP1-204ENST00000462122 LATS2Q9NRM7 1088 aa11.4□□□□□ -0.58
TRAF3IP1-204ENST00000462122 KCNK4Q9NYG8 393 aa11.4□□□□□ -0.58
TRAF3IP1-204ENST00000462122 KLHL42Q9P2K6 505 aa11.4□□□□□ -0.58
TRAF3IP1-204ENST00000462122 RABGEF1Q9UJ41 708 aa11.4□□□□□ -0.58
TRAF3IP1-204ENST00000462122 COLEC10Q9Y6Z7 277 aa11.4□□□□□ -0.58
TRAF3IP1-204ENST00000462122 ARHGEF17Q96PE2 2063 aaPredicted RBP11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 TCRBV9S1A1TA0A576 114 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 NTN3O00634 580 aaPredicted RBP11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 NIPSNAP2O75323 286 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 GPC4O75487 556 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 SLU7O95391 586 aaKnown RBP11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 AHSGP02765 367 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 RPLP0P05388 317 aaKnown RBP11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 CHRM3P20309 590 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 PDHA2P29803 388 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 ALDH4A1P30038 563 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 ATP5DP30049 168 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 PHBP35232 272 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 HSPA14Q0VDF9 509 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 FOXC1Q12948 553 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 SPIDRQ14159 915 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 KRT33BQ14525 404 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 BRD3Q15059 726 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 TTLL9Q3SXZ7 439 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 CDCP2Q5VXM1 449 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 CNSTQ6PJW8 725 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 RBM44Q6ZP01 1051 aaKnown RBP11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 TMEM26Q6ZUK4 368 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 TMPRSS7Q7RTY8 843 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 SLC22A15Q8IZD6 547 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 CHCHD4Q8N4Q1 142 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 Q8N9G6 341 aaPredicted RBP11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 OR10G6Q8NH81 332 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 GFM1Q96RP9 751 aaKnown RBP11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 DPYSL5Q9BPU6 564 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 AARSD1Q9BTE6 412 aaKnown RBP11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 MVB12BQ9H7P6 319 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 SYNDIG1Q9H7V2 258 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 LRRC4CQ9HCJ2 640 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 TXNDC16Q9P2K2 825 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 NFU1Q9UMS0 254 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 CDYLQ9Y232 598 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 SPTBN2O15020 2390 aa11.39□□□□□ -0.59
TRAF3IP1-204ENST00000462122 IGHV1OR21-1A0A087WYE8 117 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 A0A1W2PQM1 296 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 D6RAR5 112 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 DUX1O43812 170 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 VPS26AO75436 327 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 SLCO2B1O94956 709 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 CPNE6O95741 557 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 MT-CO3P00414 261 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 RPN2P04844 631 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 CD9P21926 228 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 ACADLP28330 430 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 GABRB3P28472 473 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 OR1D5P58170 312 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 GPX6P59796 221 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 CCL7P80098 99 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 SQSTM1Q13501 440 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 NAB1Q13506 487 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 GPR18Q14330 331 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 SLMAPQ14BN4 828 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 HES3Q5TGS1 186 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 UGT3A1Q6NUS8 523 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 ZNF549Q6P9A3 640 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 KLHL35Q6PF15 583 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 NAPRTQ6XQN6 538 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 STRA8Q7Z7C7 330 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 ZBTB2Q8N680 514 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 DCBLD1Q8N8Z6 715 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 TFGQ92734 400 aaPredicted RBP11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 GRAMD1AQ96CP6 724 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 AHCYL2Q96HN2 611 aaKnown RBP11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 DEPDC7Q96QD5 511 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 CDC42EP4Q9H3Q1 356 aaKnown RBP11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 KIR3DX1Q9H7L2 352 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 TAS2R13Q9NYV9 303 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 SLC17A6Q9P2U8 582 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 CLCA2Q9UQC9 943 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 ASF1AQ9Y294 204 aa11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 CFAP20Q9Y6A4 193 aaKnown RBP11.38□□□□□ -0.59
TRAF3IP1-204ENST00000462122 FAM159BA6NKW6 160 aa11.37□□□□□ -0.59
TRAF3IP1-204ENST00000462122 TMX2-CTNND1H3BSU7 103 aa11.37□□□□□ -0.59
TRAF3IP1-204ENST00000462122 EIF3FO00303 357 aaPredicted RBP11.37□□□□□ -0.59
TRAF3IP1-204ENST00000462122 B4GAT1O43505 415 aa11.37□□□□□ -0.59
TRAF3IP1-204ENST00000462122 HYAL3O43820 417 aaPredicted RBP11.37□□□□□ -0.59
TRAF3IP1-204ENST00000462122 KDM1AO60341 852 aa11.37□□□□□ -0.59
TRAF3IP1-204ENST00000462122 F7P08709 466 aaPredicted RBP11.37□□□□□ -0.59
TRAF3IP1-204ENST00000462122 ENO3P13929 434 aaPredicted RBP11.37□□□□□ -0.59
TRAF3IP1-204ENST00000462122 JUPP14923 745 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms