RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 STYXQ8WUJ0 223 aa8.93□□□□□ -0.98
BRCA1-207ENST00000461798 DNAJC1Q96KC8 554 aaKnown RBP8.93□□□□□ -0.98
BRCA1-207ENST00000461798 RMDN2Q96LZ7 410 aa8.93□□□□□ -0.98
BRCA1-207ENST00000461798 C12orf66Q96MD2 445 aa8.93□□□□□ -0.98
BRCA1-207ENST00000461798 MAP3K3Q99759 626 aa8.93□□□□□ -0.98
BRCA1-207ENST00000461798 DESI2Q9BSY9 194 aa8.93□□□□□ -0.98
BRCA1-207ENST00000461798 FAM117AQ9C073 453 aa8.93□□□□□ -0.98
BRCA1-207ENST00000461798 OR52A5Q9H2C5 316 aa8.93□□□□□ -0.98
BRCA1-207ENST00000461798 FAM96AQ9H5X1 160 aa8.93□□□□□ -0.98
BRCA1-207ENST00000461798 PDE7BQ9NP56 450 aa8.93□□□□□ -0.98
BRCA1-207ENST00000461798 PADI1Q9ULC6 663 aa8.93□□□□□ -0.98
BRCA1-207ENST00000461798 PACSIN2Q9UNF0 486 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-207ENST00000461798 R3HDM2Q9Y2K5 976 aaKnown RBP8.93□□□□□ -0.98
BRCA1-207ENST00000461798 PCDHGA6Q9Y5G7 932 aa8.93□□□□□ -0.98
BRCA1-207ENST00000461798 HEBP2Q9Y5Z4 205 aa8.93□□□□□ -0.98
BRCA1-207ENST00000461798 FLNBO75369 2602 aaKnown RBP8.92□□□□□ -0.98
BRCA1-207ENST00000461798 MATN2O00339 956 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 SLC28A2O43868 658 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 KIAA0754O94854 1291 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 SUN1O94901 812 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 ZBTB11O95625 1053 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-207ENST00000461798 PTMAP06454 111 aaKnown RBP8.92□□□□□ -0.98
BRCA1-207ENST00000461798 POLBP06746 335 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 CCNYL3P0C7X3 344 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 FOLR1P15328 257 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 TPH1P17752 444 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 TCN2P20062 427 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 ACRV1P26436 265 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 OAS2P29728 719 aaKnown RBP8.92□□□□□ -0.98
BRCA1-207ENST00000461798 PBLDP30039 288 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-207ENST00000461798 CDKN1CP49918 316 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-207ENST00000461798 POLE2P56282 527 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 HSD11B2P80365 405 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 CACNG1Q06432 222 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 CDC20Q12834 499 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 KCNAB2Q13303 367 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 ITIH4Q14624 930 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 PLCL1Q15111 1095 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 OASLQ15646 514 aaKnown RBP8.92□□□□□ -0.98
BRCA1-207ENST00000461798 SKIDA1Q1XH10 827 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 DNTTIP2Q5QJE6 756 aaKnown RBP8.92□□□□□ -0.98
BRCA1-207ENST00000461798 LCE2AQ5TA79 106 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-207ENST00000461798 SERPINA9Q86WD7 417 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 OOSP2Q86WS3 158 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 RASGRP3Q8IV61 690 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 PIANPQ8IYJ0 282 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 LILRA3Q8N6C8 439 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-207ENST00000461798 SIDT2Q8NBJ9 832 aaKnown RBP8.92□□□□□ -0.98
BRCA1-207ENST00000461798 GALNT6Q8NCL4 622 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 ACVR1CQ8NER5 493 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 NAT14Q8WUY8 206 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 APOBEC4Q8WW27 367 aaKnown RBP8.92□□□□□ -0.98
BRCA1-207ENST00000461798 STARD8Q92502 1023 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 TMEM121Q9BTD3 319 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 TFB2MQ9H5Q4 396 aaKnown RBP8.92□□□□□ -0.98
BRCA1-207ENST00000461798 COG4Q9H9E3 785 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 LATS2Q9NRM7 1088 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 KCND3Q9UK17 655 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 RARRES3Q9UL19 164 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 RIMKLBQ9ULI2 386 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 BTRCQ9Y297 605 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 CFAP20Q9Y6A4 193 aaKnown RBP8.92□□□□□ -0.98
BRCA1-207ENST00000461798 CAPN6Q9Y6Q1 641 aa8.92□□□□□ -0.98
BRCA1-207ENST00000461798 UBA6A0AVT1 1052 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-207ENST00000461798 OR6C74A6NCV1 312 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 C21orf140B9A014 251 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 CCL22O00626 93 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 LIASO43766 372 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 WISP1O95388 367 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 TIAF1O95411 115 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 MSL3P1P0C860 447 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 DLSTP36957 453 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 FDFT1P37268 417 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 NSG1P42857 185 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 KPNA2P52292 529 aaKnown RBP8.91□□□□□ -0.98
BRCA1-207ENST00000461798 TUBB4BP68371 445 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 CDH17Q12864 832 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 TUBB3Q13509 450 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 LAMB3Q13751 1172 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 TUBB2AQ13885 445 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 POU6F1Q14863 301 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 DBN1Q16643 649 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 ZRANB3Q5FWF4 1079 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 PWWP2BQ6NUJ5 590 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 ARMC6Q6NXE6 501 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 DUS1LQ6P1R4 473 aaKnown RBP8.91□□□□□ -0.98
BRCA1-207ENST00000461798 ZNF449Q6P9G9 518 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 PACS1Q6VY07 963 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 ZNF517Q6ZMY9 492 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-207ENST00000461798 ATG14Q6ZNE5 492 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 ZNF662Q6ZS27 426 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 SLC13A5Q86YT5 568 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-207ENST00000461798 OR4E2Q8NGC2 313 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 PEX13Q92968 403 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 ZNF501Q96CX3 271 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-207ENST00000461798 STAMBPL1Q96FJ0 436 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 SGSM3Q96HU1 749 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 ELMO2Q96JJ3 720 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 LRFN5Q96NI6 719 aa8.91□□□□□ -0.98
BRCA1-207ENST00000461798 RANBP9Q96S59 729 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms