RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 CA5AP35218 305 aa16.75■□□□□ 0.27
TOP3A-202ENST00000461127 CD86P42081 329 aa16.75■□□□□ 0.27
TOP3A-202ENST00000461127 MAGEA1P43355 309 aa16.75■□□□□ 0.27
TOP3A-202ENST00000461127 DMPKQ09013 629 aa16.75■□□□□ 0.27
TOP3A-202ENST00000461127 GALNT2Q10471 571 aa16.75■□□□□ 0.27
TOP3A-202ENST00000461127 TMEM115Q12893 351 aaPredicted RBP16.75■□□□□ 0.27
TOP3A-202ENST00000461127 PRKAA1Q13131 559 aa16.75■□□□□ 0.27
TOP3A-202ENST00000461127 XRCC4Q13426 336 aa16.75■□□□□ 0.27
TOP3A-202ENST00000461127 ART3Q13508 389 aa16.75■□□□□ 0.27
TOP3A-202ENST00000461127 GALNT3Q14435 633 aa16.75■□□□□ 0.27
TOP3A-202ENST00000461127 PTCHD3Q3KNS1 767 aa16.75■□□□□ 0.27
TOP3A-202ENST00000461127 FJX1Q86VR8 437 aa16.75■□□□□ 0.27
TOP3A-202ENST00000461127 BRSK1Q8TDC3 778 aa16.75■□□□□ 0.27
TOP3A-202ENST00000461127 TEKT4Q8WW24 435 aa16.75■□□□□ 0.27
TOP3A-202ENST00000461127 FATE1Q969F0 183 aa16.75■□□□□ 0.27
TOP3A-202ENST00000461127 VPS35Q96QK1 796 aa16.75■□□□□ 0.27
TOP3A-202ENST00000461127 WDR77Q9BQA1 342 aaPredicted RBP16.75■□□□□ 0.27
TOP3A-202ENST00000461127 ZCCHC2Q9C0B9 1178 aaKnown RBP16.75■□□□□ 0.27
TOP3A-202ENST00000461127 MRPL47Q9HD33 250 aaKnown RBP16.75■□□□□ 0.27
TOP3A-202ENST00000461127 SERTAD3Q9UJW9 196 aa16.75■□□□□ 0.27
TOP3A-202ENST00000461127 KLF2Q9Y5W3 355 aaPredicted RBP16.75■□□□□ 0.27
TOP3A-202ENST00000461127 PKDREJQ9NTG1 2253 aa16.75■□□□□ 0.27
TOP3A-202ENST00000461127 OR6C74A6NCV1 312 aa16.74■□□□□ 0.27
TOP3A-202ENST00000461127 ZSCAN12O43309 604 aa16.74■□□□□ 0.27
TOP3A-202ENST00000461127 MFSD11O43934 449 aa16.74■□□□□ 0.27
TOP3A-202ENST00000461127 CD63P08962 238 aa16.74■□□□□ 0.27
TOP3A-202ENST00000461127 MTHFD1P11586 935 aaKnown RBP16.74■□□□□ 0.27
TOP3A-202ENST00000461127 GZMAP12544 262 aa16.74■□□□□ 0.27
TOP3A-202ENST00000461127 PREPP48147 710 aa16.74■□□□□ 0.27
TOP3A-202ENST00000461127 KHDC1Q4VXA5 237 aaKnown RBP16.74■□□□□ 0.27
TOP3A-202ENST00000461127 TMC3Q7Z5M5 1100 aa16.74■□□□□ 0.27
TOP3A-202ENST00000461127 OR1L3Q8NH93 324 aa16.74■□□□□ 0.27
TOP3A-202ENST00000461127 GRHL3Q8TE85 626 aa16.74■□□□□ 0.27
TOP3A-202ENST00000461127 ZFPM2Q8WW38 1151 aa16.74■□□□□ 0.27
TOP3A-202ENST00000461127 TSGA13Q96PP4 275 aa16.74■□□□□ 0.27
TOP3A-202ENST00000461127 TRAPPC9Q96Q05 1148 aa16.74■□□□□ 0.27
TOP3A-202ENST00000461127 MAGEE1Q9HCI5 957 aa16.74■□□□□ 0.27
TOP3A-202ENST00000461127 ATP13A2Q9NQ11 1180 aa16.74■□□□□ 0.27
TOP3A-202ENST00000461127 GPN3Q9UHW5 284 aaPredicted RBP16.74■□□□□ 0.27
TOP3A-202ENST00000461127 PPP2R2CQ9Y2T4 447 aa16.74■□□□□ 0.27
TOP3A-202ENST00000461127 PCDHA13Q9Y5I0 950 aa16.74■□□□□ 0.27
TOP3A-202ENST00000461127 NF1P21359 2839 aa16.74■□□□□ 0.27
TOP3A-202ENST00000461127 SLC9B1P1A6NJY1 282 aa16.73■□□□□ 0.27
TOP3A-202ENST00000461127 E7EQ34 232 aa16.73■□□□□ 0.27
TOP3A-202ENST00000461127 E2F3O00716 465 aa16.73■□□□□ 0.27
TOP3A-202ENST00000461127 DDX3YO15523 660 aaKnown RBP16.73■□□□□ 0.27
TOP3A-202ENST00000461127 KLF7O75840 302 aaPredicted RBP16.73■□□□□ 0.27
TOP3A-202ENST00000461127 FTLP02792 175 aaPredicted RBP16.73■□□□□ 0.27
TOP3A-202ENST00000461127 STSP08842 583 aa16.73■□□□□ 0.27
TOP3A-202ENST00000461127 H2AFZP0C0S5 128 aa16.73■□□□□ 0.27
TOP3A-202ENST00000461127 PIRTP0C851 137 aa16.73■□□□□ 0.27
TOP3A-202ENST00000461127 TCF4P15884 667 aa16.73■□□□□ 0.27
TOP3A-202ENST00000461127 BPIP17213 487 aa16.73■□□□□ 0.27
TOP3A-202ENST00000461127 FOLR3P41439 243 aa16.73■□□□□ 0.27
TOP3A-202ENST00000461127 KPNA2P52292 529 aaKnown RBP16.73■□□□□ 0.27
TOP3A-202ENST00000461127 SOX8P57073 446 aa16.73■□□□□ 0.27
TOP3A-202ENST00000461127 MLIPQ5VWP3 458 aa16.73■□□□□ 0.27
TOP3A-202ENST00000461127 FBXO38Q6PIJ6 1188 aa16.73■□□□□ 0.27
TOP3A-202ENST00000461127 SPOCD1Q6ZMY3 1216 aa16.73■□□□□ 0.27
TOP3A-202ENST00000461127 H2AFVQ71UI9 128 aa16.73■□□□□ 0.27
TOP3A-202ENST00000461127 PPP4R1Q8TF05 950 aa16.73■□□□□ 0.27
TOP3A-202ENST00000461127 FAR1Q8WVX9 515 aa16.73■□□□□ 0.27
TOP3A-202ENST00000461127 CHST11Q9NPF2 352 aa16.73■□□□□ 0.27
TOP3A-202ENST00000461127 C1GALT1Q9NS00 363 aa16.73■□□□□ 0.27
TOP3A-202ENST00000461127 P4HTMQ9NXG6 502 aa16.73■□□□□ 0.27
TOP3A-202ENST00000461127 NOVA2Q9UNW9 492 aaKnown RBP16.73■□□□□ 0.27
TOP3A-202ENST00000461127 PTRH2Q9Y3E5 179 aaKnown RBP16.73■□□□□ 0.27
TOP3A-202ENST00000461127 ZNF711Q9Y462 761 aa16.73■□□□□ 0.27
TOP3A-202ENST00000461127 PCSK5Q92824 1860 aa16.73■□□□□ 0.27
TOP3A-202ENST00000461127 MYO7BQ6PIF6 2116 aa16.72■□□□□ 0.27
TOP3A-202ENST00000461127 MATN2O00339 956 aa16.72■□□□□ 0.27
TOP3A-202ENST00000461127 POP7O75817 140 aaKnown RBP16.72■□□□□ 0.27
TOP3A-202ENST00000461127 MSL3P1P0C860 447 aa16.72■□□□□ 0.27
TOP3A-202ENST00000461127 MSNP26038 577 aaKnown RBP16.72■□□□□ 0.27
TOP3A-202ENST00000461127 TSFMP43897 325 aaKnown RBP16.72■□□□□ 0.27
TOP3A-202ENST00000461127 ARCN1P48444 511 aaKnown RBP16.72■□□□□ 0.27
TOP3A-202ENST00000461127 PIGHQ14442 188 aaPredicted RBP16.72■□□□□ 0.27
TOP3A-202ENST00000461127 PAFAH1B3Q15102 231 aaKnown RBP16.72■□□□□ 0.27
TOP3A-202ENST00000461127 CYP2A13Q16696 494 aa16.72■□□□□ 0.27
TOP3A-202ENST00000461127 B4GALNT4Q76KP1 1039 aa16.72■□□□□ 0.27
TOP3A-202ENST00000461127 BEND7Q8N7W2 519 aaPredicted RBP16.72■□□□□ 0.27
TOP3A-202ENST00000461127 TRIM11Q96F44 468 aa16.72■□□□□ 0.27
TOP3A-202ENST00000461127 AGAP3Q96P47 875 aa16.72■□□□□ 0.27
TOP3A-202ENST00000461127 GBP5Q96PP8 586 aa16.72■□□□□ 0.27
TOP3A-202ENST00000461127 ZBTB20Q9HC78 741 aaPredicted RBP16.72■□□□□ 0.27
TOP3A-202ENST00000461127 MYO1AQ9UBC5 1043 aa16.72■□□□□ 0.27
TOP3A-202ENST00000461127 NENFQ9UMX5 172 aa16.72■□□□□ 0.27
TOP3A-202ENST00000461127 REXO2Q9Y3B8 237 aaKnown RBP16.72■□□□□ 0.27
TOP3A-202ENST00000461127 CFAP20Q9Y6A4 193 aaKnown RBP16.72■□□□□ 0.27
TOP3A-202ENST00000461127 DNMT3AQ9Y6K1 912 aaPredicted RBP16.72■□□□□ 0.27
TOP3A-202ENST00000461127 TACC2O95359 2948 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 ZNF749O43361 778 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 MMP2P08253 660 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 MYBL1P10243 752 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 COX6B1P14854 86 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 POLR2CP19387 275 aaPredicted RBP16.71■□□□□ 0.27
TOP3A-202ENST00000461127 HLA-DPA1P20036 260 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 MX2P20592 715 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 KIF5AQ12840 1032 aa16.71■□□□□ 0.27
TOP3A-202ENST00000461127 CDC16Q13042 620 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms