RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 CWC15Q9P013 229 aaKnown RBP3.53□□□□□ -1.84
SSX2IP-204ENST00000459708 OR14J1Q9UGF5 321 aa3.53□□□□□ -1.84
SSX2IP-204ENST00000459708 POU2F3Q9UKI9 436 aa3.53□□□□□ -1.84
SSX2IP-204ENST00000459708 RGPD3A6NKT7 1758 aaPredicted RBP3.53□□□□□ -1.84
SSX2IP-204ENST00000459708 RGPD4Q7Z3J3 1758 aa3.53□□□□□ -1.84
SSX2IP-204ENST00000459708 SMCHD1A6NHR9 2005 aa3.53□□□□□ -1.84
SSX2IP-204ENST00000459708 AK9Q5TCS8 1911 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 MED23Q9ULK4 1368 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 MAP3K15Q6ZN16 1313 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 A0A1W2PP11 408 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 A0A1W2PS18 150 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 LIPT2A6NK58 231 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 TMEM178BH3BS89 294 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 ANKRD28O15084 1053 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 HCRTR2O43614 444 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 WDR1O75083 606 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 NDUFS3O75489 264 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 SURF6O75683 361 aaKnown RBP3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 SLC22A3O75751 556 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 ATP1A1P05023 1023 aaKnown RBP3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 ICAM1P05362 532 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 UQCRFS1P1P0C7P4 283 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 FAM106CPP0CH98 169 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 UGT1A1P22309 533 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 PAX3P23760 479 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 CHMLP26374 656 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 EVCP57679 992 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 PITX1P78337 314 aaPredicted RBP3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 MRPS34P82930 218 aaKnown RBP3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 GRIK2Q13002 908 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 KRTCAP3Q53RY4 240 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 ZNF805Q5CZA5 627 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 SIRPB2Q5JXA9 342 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 SNX30Q5VWJ9 437 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 NSUN5P2Q63ZY6 315 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 OR7E24Q6IFN5 339 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 LCN10Q6JVE6 187 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 TMTC2Q8N394 836 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 OR52I2Q8NH67 350 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 ALG14Q96F25 216 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 ELMOD3Q96FG2 381 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 CCDC34Q96HJ3 373 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 HES6Q96HZ4 224 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 EPYCQ99645 322 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 POLR3CQ9BUI4 534 aaPredicted RBP3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 ITPAQ9BY32 194 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 NYXQ9GZU5 481 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 ZSCAN16Q9H4T2 348 aaPredicted RBP3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 MDFICQ9P1T7 246 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 R3HDM2Q9Y2K5 976 aaKnown RBP3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 DDX60Q8IY21 1712 aaKnown RBP3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 ARAP2Q8WZ64 1704 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 C10orf71Q711Q0 1435 aa3.52□□□□□ -1.85
SSX2IP-204ENST00000459708 NID2Q14112 1375 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 PHLPP1O60346 1717 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 MYH3P11055 1940 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 ZCWPW2A0A1B0GU75 182 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 FAM172BPA6NC97 362 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 EIF4E1BA6NMX2 242 aaKnown RBP3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 KCNN4O15554 427 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 ZNHIT1O43257 154 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 FGF17O60258 216 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 EIF2S1P05198 315 aaKnown RBP3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 TPM3P06753 285 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 SP1P08047 785 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 LAMP2P13473 410 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 CHMP24386 653 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 NFKBIAP25963 317 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 PIK3CAP42336 1068 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 ZBED6P86452 979 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 NIPAL4Q0D2K0 466 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 PDE1CQ14123 709 aaPredicted RBP3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 CCDC57Q2TAC2 916 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 MYLK3Q32MK0 819 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 ACCSLQ4AC99 568 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 TMEM35AQ53FP2 167 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 SOWAHCQ53LP3 525 aaPredicted RBP3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 CCDC158Q5M9N0 1113 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 GKAP1Q5VSY0 366 aaPredicted RBP3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 FAM180BQ6P0A1 224 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 FAM171BQ6P995 826 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 C19orf48Q6RUI8 117 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 ZNF852Q6ZMS4 543 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 ZNF704Q6ZNC4 412 aaPredicted RBP3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 MAP7D3Q8IWC1 876 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 ADSSL1Q8N142 457 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 PDILTQ8N807 584 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 THAP6Q8TBB0 222 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 NR4A3Q92570 626 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 ARHGEF2Q92974 986 aaKnown RBP3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 LINGO1Q96FE5 620 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 MPP4Q96JB8 637 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 THUMPD2Q9BTF0 503 aaKnown RBP3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 OLA1Q9NTK5 396 aaKnown RBP3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 SETD4Q9NVD3 440 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 EHD2Q9NZN4 543 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 KLHL9Q9P2J3 617 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 FBXW11Q9UKB1 542 aa3.51□□□□□ -1.85
SSX2IP-204ENST00000459708 CFAP45Q9UL16 551 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms