RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 KIR3DX1Q9H7L2 352 aa17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 CFAP20Q9Y6A4 193 aaKnown RBP17.11■□□□□ 0.33
SCARNA2-201ENST00000458748 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 CES2O00748 559 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 GOT2P00505 430 aaKnown RBP17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 KRT14P02533 472 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 TTPAP49638 278 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 ARSDP51689 593 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 GPS1Q13098 491 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 SYTL3Q4VX76 610 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 DNTTIP2Q5QJE6 756 aaKnown RBP17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 ANKS6Q68DC2 871 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 CAPRIN2Q6IMN6 1127 aaKnown RBP17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 LRRC8BQ6P9F7 803 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 KMT5CQ86Y97 462 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 CARFQ8N187 725 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 SLC35F6Q8N357 371 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 MPP5Q8N3R9 675 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 ZNF843Q8N446 348 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 CLDN19Q8N6F1 224 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 ACVR1CQ8NER5 493 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 ACTRT1Q8TDG2 376 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 RSC1A1Q92681 617 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 RMDN2Q96LZ7 410 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 OSBPL9Q96SU4 736 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 TRIT1Q9H3H1 467 aaKnown RBP17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 MVB12BQ9H7P6 319 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 CATSPERZQ9NTU4 200 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 HRASLS2Q9NWW9 162 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 SLC24A2Q9UI40 661 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 B3GALT1Q9Y5Z6 326 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 KALRNO60229 2985 aa17.1■□□□□ 0.33
SCARNA2-201ENST00000458748 ATMQ13315 3056 aa17.09■□□□□ 0.33
SCARNA2-201ENST00000458748 UBA6A0AVT1 1052 aaPredicted RBP17.09■□□□□ 0.33
SCARNA2-201ENST00000458748 OR5K3A6NET4 321 aa17.09■□□□□ 0.33
SCARNA2-201ENST00000458748 EFSO43281 561 aa17.09■□□□□ 0.33
SCARNA2-201ENST00000458748 FOXM1Q08050 763 aa17.09■□□□□ 0.33
SCARNA2-201ENST00000458748 IL11RAQ14626 422 aa17.09■□□□□ 0.33
SCARNA2-201ENST00000458748 CCDC137Q6PK04 289 aaKnown RBP17.09■□□□□ 0.33
SCARNA2-201ENST00000458748 FAM92BQ6ZTR7 304 aa17.09■□□□□ 0.33
SCARNA2-201ENST00000458748 IL22RA1Q8N6P7 574 aa17.09■□□□□ 0.33
SCARNA2-201ENST00000458748 NAT14Q8WUY8 206 aa17.09■□□□□ 0.33
SCARNA2-201ENST00000458748 ELMO1Q92556 727 aa17.09■□□□□ 0.33
SCARNA2-201ENST00000458748 FERD3LQ96RJ6 166 aa17.09■□□□□ 0.33
SCARNA2-201ENST00000458748 AP1M1Q9BXS5 423 aa17.09■□□□□ 0.33
SCARNA2-201ENST00000458748 MRM3Q9HC36 420 aaKnown RBP17.09■□□□□ 0.33
SCARNA2-201ENST00000458748 CHRAC1Q9NRG0 131 aa17.09■□□□□ 0.33
SCARNA2-201ENST00000458748 TRMT1Q9NXH9 659 aaKnown RBP17.09■□□□□ 0.33
SCARNA2-201ENST00000458748 OR51F1A6NGY5 319 aa17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 MAP3K7O43318 606 aa17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 PRSS56P0CW18 603 aa17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 PAMP19021 973 aa17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 MAP4P27816 1152 aaKnown RBP17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 COILP38432 576 aaPredicted RBP17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 LEPRP48357 1165 aaKnown RBP17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 FNTAP49354 379 aa17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 SEPHS1P49903 392 aa17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 CYP1B1Q16678 543 aa17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 SDCCAG8Q86SQ7 713 aaPredicted RBP17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 BPHLQ86WA6 291 aaPredicted RBP17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 OTUD6BQ8N6M0 293 aa17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 SPDYE1Q8NFV5 336 aaPredicted RBP17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 LCN9Q8WX39 176 aa17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 TTC9Q92623 222 aa17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 NKD1Q969G9 470 aa17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 PMEPA1Q969W9 287 aa17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 KIAA1143Q96AT1 154 aaPredicted RBP17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 MS4A14Q96JA4 679 aa17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 EFHD1Q9BUP0 239 aa17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 OR52A5Q9H2C5 316 aa17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 SRMSQ9H3Y6 488 aa17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 PDE7BQ9NP56 450 aa17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 SAMD15Q9P1V8 674 aa17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 SLC2A6Q9UGQ3 507 aa17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 SNX12Q9UMY4 172 aa17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 HELZ2Q9BYK8 2649 aaKnown RBP17.08■□□□□ 0.32
SCARNA2-201ENST00000458748 MAGEB16A2A368 324 aa17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 OR6C74A6NCV1 312 aa17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 TLCD2A6NGC4 264 aa17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 CD3EAPO15446 510 aaKnown RBP17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 PHF2O75151 1096 aa17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 ZIC2O95409 532 aaPredicted RBP17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 TCP1P17987 556 aaKnown RBP17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 NELFEP18615 380 aaKnown RBP17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 MAGEA6P43360 314 aa17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 VPS41P49754 854 aa17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 BOP1Q14137 746 aaKnown RBP17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 TRIP13Q15645 432 aaPredicted RBP17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 TMTC4Q5T4D3 741 aa17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 MRNIPQ6NTE8 343 aa17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 DUS1LQ6P1R4 473 aaKnown RBP17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 LRRC6Q86X45 466 aa17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 CACNA2D3Q8IZS8 1091 aa17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 NLGN4XQ8N0W4 816 aa17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 SIDT2Q8NBJ9 832 aaKnown RBP17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 NLGN4YQ8NFZ3 816 aaPredicted RBP17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 GSDMBQ8TAX9 411 aa17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 KLHL6Q8WZ60 621 aa17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 TFGQ92734 400 aaPredicted RBP17.07■□□□□ 0.32
SCARNA2-201ENST00000458748 ZNF778Q96MU6 729 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms