RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 SFXN1Q9H9B4 322 aa16.08■□□□□ 0.17
LSS-205ENST00000457828 EXD2Q9NVH0 621 aa16.08■□□□□ 0.17
LSS-205ENST00000457828 USE1Q9NZ43 259 aa16.08■□□□□ 0.17
LSS-205ENST00000457828 PCDH10Q9P2E7 1040 aa16.08■□□□□ 0.17
LSS-205ENST00000457828 GMPR2Q9P2T1 348 aaKnown RBP16.08■□□□□ 0.17
LSS-205ENST00000457828 GSNP06396 782 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 FOSL2P15408 326 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 ZNF12P17014 697 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 DDX6P26196 483 aaKnown RBP eCLIP16.08■□□□□ 0.165e-7■■■■■ 46.6
LSS-205ENST00000457828 MAPK9P45984 424 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 RAB39AQ14964 217 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 AP5B1Q2VPB7 878 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 HTRA1Q92743 480 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 CDK15Q96Q40 435 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 ACTR3BQ9P1U1 418 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 HS3ST4Q9Y661 456 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 SMIM18P0DKX4 95 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 IL7RP16871 459 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 SLC10A7Q0GE19 358 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 GRB7Q14451 532 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 ZNF846Q147U1 533 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 PROSER1Q86XN7 944 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 POC5Q8NA72 575 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 SETD9Q8NE22 299 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 TAMM41Q96BW9 452 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 NMUR1Q9HB89 426 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 CD320Q9NPF0 282 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 RASSF1Q9NS23 344 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 EIF2B4Q9UI10 523 aaKnown RBP16.08■□□□□ 0.16
LSS-205ENST00000457828 ARL5AQ9Y689 179 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 CEPT1Q9Y6K0 416 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 ARFGEF1Q9Y6D6 1849 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 PRSS51A0A1B0GVH4 220 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 M0QZQ0 153 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 LEFTY2O00292 366 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 PRNPP04156 253 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 DBTP11182 482 aaKnown RBP16.08■□□□□ 0.16
LSS-205ENST00000457828 ADH5P11766 374 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 POU1F1P28069 291 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 TIE1P35590 1138 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 GGT5P36269 586 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 EPS8Q12929 822 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 PRR23CQ6ZRP0 262 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 OR10A6Q8NH74 314 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 NSUN5Q96P11 429 aaKnown RBP16.08■□□□□ 0.16
LSS-205ENST00000457828 RMND5AQ9H871 391 aa16.08■□□□□ 0.16
LSS-205ENST00000457828 RAD51BO15315 384 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 ALOX15P16050 662 aaPredicted RBP16.07■□□□□ 0.16
LSS-205ENST00000457828 ELK4P28324 431 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 SEPHS1P49903 392 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 INHBCP55103 352 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 FAM151BQ6UXP7 276 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 C11orf96Q7Z7L8 435 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 CAPSLQ8WWF8 208 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 REXO4Q9GZR2 422 aaKnown RBP16.07■□□□□ 0.16
LSS-205ENST00000457828 CXCL16Q9H2A7 254 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 GMPPBQ9Y5P6 360 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 TRIM43BA6NCK2 446 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 MFN2O95140 757 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 S100A3P33764 101 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 ZNF829Q3KNS6 432 aaPredicted RBP16.07■□□□□ 0.16
LSS-205ENST00000457828 ZNF789Q5FWF6 425 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 RSBN1Q5VWQ0 802 aaPredicted RBP16.07■□□□□ 0.16
LSS-205ENST00000457828 PAQR3Q6TCH7 311 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 PAGE2Q7Z2X7 111 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 ZC3H7AQ8IWR0 971 aaKnown RBP16.07■□□□□ 0.16
LSS-205ENST00000457828 SLC15A3Q8IY34 581 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 CENPIQ92674 756 aaPredicted RBP16.07■□□□□ 0.16
LSS-205ENST00000457828 IRF7Q92985 503 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 OLFM1Q99784 485 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 KXD1Q9BQD3 176 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 HERC2P3Q9BVR0 1158 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 PDE10AQ9Y233 779 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 CLDN25C9JDP6 229 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 SLC7A4O43246 635 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 SLC25A14O95258 325 aaPredicted RBP16.07■□□□□ 0.16
LSS-205ENST00000457828 HNRNPA1P09651 372 aaKnown RBP eCLIP16.07■□□□□ 0.16
LSS-205ENST00000457828 DMPKQ09013 629 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 TECRLQ5HYJ1 363 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 FGD3Q5JSP0 725 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 PPP4R4Q6NUP7 873 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 SPNS2Q8IVW8 549 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 HERVK_113Q902F9 699 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 ELMO1Q92556 727 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 SLC47A1Q96FL8 570 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 APOL4Q9BPW4 351 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 EPB41L1Q9H4G0 881 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 ZNF556Q9HAH1 456 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 PADI4Q9UM07 663 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 GMEB1Q9Y692 573 aa16.07■□□□□ 0.16
LSS-205ENST00000457828 C2orf78A6NCI8 922 aa16.06■□□□□ 0.16
LSS-205ENST00000457828 POP4O95707 220 aaKnown RBP16.06■□□□□ 0.16
LSS-205ENST00000457828 TYRP14679 529 aa16.06■□□□□ 0.16
LSS-205ENST00000457828 HTR1BP28222 390 aa16.06■□□□□ 0.16
LSS-205ENST00000457828 IDH2P48735 452 aaKnown RBP16.06■□□□□ 0.16
LSS-205ENST00000457828 UFM1P61960 85 aa16.06■□□□□ 0.16
LSS-205ENST00000457828 UBE3AQ05086 875 aa16.06■□□□□ 0.16
LSS-205ENST00000457828 TRAF3Q13114 568 aa16.06■□□□□ 0.16
LSS-205ENST00000457828 FAM26DQ5JW98 314 aa16.06■□□□□ 0.16
LSS-205ENST00000457828 SPATA19Q7Z5L4 167 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms