RNA–Protein interactions for RNA: ENST00000457226.2

SMARCA2-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-216ENST00000457226 LATS2Q9NRM7 1088 aa13.09□□□□□ -0.31
SMARCA2-216ENST00000457226 NLE1Q9NVX2 485 aaPredicted RBP13.09□□□□□ -0.31
SMARCA2-216ENST00000457226 IMPACTQ9P2X3 320 aa13.09□□□□□ -0.31
SMARCA2-216ENST00000457226 REXO2Q9Y3B8 237 aaKnown RBP13.09□□□□□ -0.31
SMARCA2-216ENST00000457226 KCNMB2Q9Y691 235 aa13.09□□□□□ -0.31
SMARCA2-216ENST00000457226 CFAP20Q9Y6A4 193 aaKnown RBP13.09□□□□□ -0.31
SMARCA2-216ENST00000457226 UBR5O95071 2799 aaPredicted RBP13.09□□□□□ -0.31
SMARCA2-216ENST00000457226 FLNBO75369 2602 aaKnown RBP13.09□□□□□ -0.31
SMARCA2-216ENST00000457226 PIPSLA2A3N6 862 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 GOLGA6L6A8MZA4 724 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 POLBP06746 335 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 KLK3P07288 261 aaPredicted RBP13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 MSL3P1P0C860 447 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 EBLN1P0CF75 366 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 FOLR1P15328 257 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 ACRV1P26436 265 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 STIP1P31948 543 aaKnown RBP13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 CA5AP35218 305 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 CASRP41180 1078 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 GSDMDP57764 484 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 PLOD1Q02809 727 aaPredicted RBP13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 CACNG1Q06432 222 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 DNASE1L3Q13609 305 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 SKIDA1Q1XH10 827 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 LACTB2Q53H82 288 aaPredicted RBP13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 ZRANB3Q5FWF4 1079 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 KCTD11Q693B1 232 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 PWWP2BQ6NUJ5 590 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 RAD9BQ6WBX8 426 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 TMEM126BQ8IUX1 230 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 FAM71DQ8N9W8 422 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 SPDYE1Q8NFV5 336 aaPredicted RBP13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 STYXQ8WUJ0 223 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 LCN9Q8WX39 176 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 THAP4Q8WY91 577 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 ABHD17AQ96GS6 310 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 RMDN2Q96LZ7 410 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 TTC1Q99614 292 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 TWSG1Q9GZX9 223 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 TFB2MQ9H5Q4 396 aaKnown RBP13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 C1GALT1Q9NS00 363 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 KCND1Q9NSA2 647 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 SOHLH2Q9NX45 425 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 FAM8A1Q9UBU6 413 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 BTRCQ9Y297 605 aa13.08□□□□□ -0.32
SMARCA2-216ENST00000457226 TLN1Q9Y490 2541 aaKnown RBP13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 TRBV5-4A0A0C4DH59 114 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 SGTAO43765 313 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 KDM1AO60341 852 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 RFPL1O75677 317 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 SCRG1O75711 98 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 AP2A1O95782 977 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 CDH3P22223 829 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 F8A1P23610 371 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 NSG1P42857 185 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 PMS2P54278 862 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 PPP1CAP62136 330 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 TMPRSS15P98073 1019 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 NFKB2Q00653 900 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 TLE1Q04724 770 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 KLF1Q13351 362 aaPredicted RBP13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 ERV3-1Q14264 604 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 LYPLAL1Q5VWZ2 237 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 TAS2R42Q7RTR8 314 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 SYVN1Q86TM6 617 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 SERPINA9Q86WD7 417 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 RNF10Q8N5U6 811 aaKnown RBP13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 ACRBPQ8NEB7 543 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 OR4E2Q8NGC2 313 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 CT55Q8WUE5 264 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 CPT1BQ92523 772 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 LRFN5Q96NI6 719 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 FERD3LQ96RJ6 166 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 FAM118BQ9BPY3 351 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 COG4Q9H9E3 785 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 POMT2Q9UKY4 750 aa13.07□□□□□ -0.32
SMARCA2-216ENST00000457226 C2orf74A8MZ97 194 aa13.06□□□□□ -0.32
SMARCA2-216ENST00000457226 LIN7AO14910 233 aaPredicted RBP13.06□□□□□ -0.32
SMARCA2-216ENST00000457226 FTH1P02794 183 aa13.06□□□□□ -0.32
SMARCA2-216ENST00000457226 PTPN4P29074 926 aa13.06□□□□□ -0.32
SMARCA2-216ENST00000457226 PPARGP37231 505 aaPredicted RBP13.06□□□□□ -0.32
SMARCA2-216ENST00000457226 KLRB1Q12918 225 aa13.06□□□□□ -0.32
SMARCA2-216ENST00000457226 OLIG2Q13516 323 aa13.06□□□□□ -0.32
SMARCA2-216ENST00000457226 SPARCL1Q14515 664 aa13.06□□□□□ -0.32
SMARCA2-216ENST00000457226 ITIH4Q14624 930 aa13.06□□□□□ -0.32
SMARCA2-216ENST00000457226 KCNAB1Q14722 419 aa13.06□□□□□ -0.32
SMARCA2-216ENST00000457226 TCTN3Q6NUS6 607 aa13.06□□□□□ -0.32
SMARCA2-216ENST00000457226 DUS1LQ6P1R4 473 aaKnown RBP13.06□□□□□ -0.32
SMARCA2-216ENST00000457226 HOOK3Q86VS8 718 aa13.06□□□□□ -0.32
SMARCA2-216ENST00000457226 PTRH1Q86Y79 214 aaKnown RBP13.06□□□□□ -0.32
SMARCA2-216ENST00000457226 APLFQ8IW19 511 aaPredicted RBP13.06□□□□□ -0.32
SMARCA2-216ENST00000457226 SLC35B2Q8TB61 432 aa13.06□□□□□ -0.32
SMARCA2-216ENST00000457226 ZNF501Q96CX3 271 aaPredicted RBP13.06□□□□□ -0.32
SMARCA2-216ENST00000457226 CDKN2AIPNLQ96HQ2 116 aa13.06□□□□□ -0.32
SMARCA2-216ENST00000457226 DNAJC1Q96KC8 554 aaKnown RBP13.06□□□□□ -0.32
SMARCA2-216ENST00000457226 DPH2Q9BQC3 489 aaPredicted RBP13.06□□□□□ -0.32
SMARCA2-216ENST00000457226 TSGA10Q9BZW7 698 aa13.06□□□□□ -0.32
SMARCA2-216ENST00000457226 TRIM4Q9C037 500 aa13.06□□□□□ -0.32
SMARCA2-216ENST00000457226 RBSNQ9H1K0 784 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms