RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 OOSP2Q86WS3 158 aa17.64■□□□□ 0.41
PDLIM2-215ENST00000456545 CREG2Q8IUH2 290 aa17.64■□□□□ 0.41
PDLIM2-215ENST00000456545 PHC3Q8NDX5 983 aa17.64■□□□□ 0.41
PDLIM2-215ENST00000456545 GSDMBQ8TAX9 411 aa17.64■□□□□ 0.41
PDLIM2-215ENST00000456545 TFGQ92734 400 aaPredicted RBP17.64■□□□□ 0.41
PDLIM2-215ENST00000456545 ASPSCR1Q9BZE9 553 aa17.64■□□□□ 0.41
PDLIM2-215ENST00000456545 MVB12BQ9H7P6 319 aa17.64■□□□□ 0.41
PDLIM2-215ENST00000456545 HRASLS2Q9NWW9 162 aa17.64■□□□□ 0.41
PDLIM2-215ENST00000456545 SLC24A2Q9UI40 661 aa17.64■□□□□ 0.41
PDLIM2-215ENST00000456545 NEU2Q9Y3R4 380 aa17.64■□□□□ 0.41
PDLIM2-215ENST00000456545 BPTFQ12830 3046 aa17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 UBA6A0AVT1 1052 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 B4E171 279 aa17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 PRMT5O14744 637 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 TMEM63AO94886 807 aa17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 C9P02748 559 aa17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 CD82P27701 267 aa17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 TSPAN7P41732 249 aa17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 LEPRP48357 1165 aaKnown RBP17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 ARL4DP49703 201 aa17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 RAB15P59190 212 aa17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 FOXM1Q08050 763 aa17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 THOC5Q13769 683 aaKnown RBP17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 SEMA3AQ14563 771 aa17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 NAPRTQ6XQN6 538 aa17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 MPP5Q8N3R9 675 aa17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 ACVR1CQ8NER5 493 aa17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 OR4E2Q8NGC2 313 aa17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 LCN9Q8WX39 176 aa17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 SERPINB12Q96P63 405 aa17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 CARD6Q9BX69 1037 aa17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 B3GNT4Q9C0J1 378 aa17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 OR52A5Q9H2C5 316 aa17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 SRMSQ9H3Y6 488 aa17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 KIR3DX1Q9H7L2 352 aa17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 MARCH4Q9P2E8 410 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 EPHA6Q9UF33 1036 aa17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 PCYOX1Q9UHG3 505 aa17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 PIKFYVEQ9Y2I7 2098 aa17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 MN1Q10571 1320 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-215ENST00000456545 OR6C74A6NCV1 312 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 C9orf172C9J069 976 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 GOLGA8KD6RF30 607 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 GOLGA8TH3BQL2 631 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 CCDC188H7C350 402 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 TOX3O15405 576 aaPredicted RBP17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 APOA4P06727 396 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 UCNP55089 124 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 DR1Q01658 176 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 MC2RQ01718 297 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 HSPA14Q0VDF9 509 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 PRKG2Q13237 762 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 PTK6Q13882 451 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 DHX34Q14147 1143 aaKnown RBP17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 CEACAM20Q6UY09 585 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 SYDE1Q6ZW31 735 aaPredicted RBP17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 PDZD3Q86UT5 571 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 LRRC6Q86X45 466 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 ZFAND4Q86XD8 727 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 NAT8LQ8N9F0 302 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 ASZ1Q8WWH4 475 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 ZNF669Q96BR6 464 aaPredicted RBP17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 PANX3Q96QZ0 392 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 DDA1Q9BW61 102 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 RAB33BQ9H082 229 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 GNPTGQ9UJJ9 305 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 ASF1AQ9Y294 204 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 RPS6KL1Q9Y6S9 549 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 APC2O95996 2303 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 ADAMTS20P59510 1910 aa17.62■□□□□ 0.41
PDLIM2-215ENST00000456545 CACNA1BQ00975 2339 aa17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 EPG5Q9HCE0 2579 aa17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 FAM237BA0A1B0GVD1 139 aa17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 OR5K3A6NET4 321 aa17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 DNALI1O14645 258 aaPredicted RBP17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 KPNA5O15131 536 aa17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 POLR1CO15160 346 aaPredicted RBP17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 KIF1CO43896 1103 aaKnown RBP17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 KDM1AO60341 852 aa17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 ANKRD34CP0C6C1 535 aa17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 LIPCP11150 499 aa17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 EIF3BP55884 814 aaKnown RBP17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 CXADRP78310 365 aa17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 TLE3Q04726 772 aa17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 TMED2Q15363 201 aa17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 ANKRD20A4Q4UJ75 823 aa17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 DNTTIP2Q5QJE6 756 aaKnown RBP17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 RNF187Q5TA31 235 aaPredicted RBP17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 IZUMO3Q5VZ72 239 aa17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 ANKS6Q68DC2 871 aa17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 KIAA0930Q6ICG6 404 aaPredicted RBP17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 TEFMQ96QE5 360 aaKnown RBP17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 TCF12Q99081 682 aa17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 CTRCQ99895 268 aa17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 TRIT1Q9H3H1 467 aaKnown RBP17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 FBXO8Q9NRD0 319 aa17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 FOXJ2Q9P0K8 574 aa17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 TDRKHQ9Y2W6 561 aaKnown RBP17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 PCDHGA3Q9Y5H0 932 aa17.61■□□□□ 0.41
PDLIM2-215ENST00000456545 B3GALT1Q9Y5Z6 326 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms