RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 DNTTP04053 509 aa10.15□□□□□ -0.78
CLIP4-208ENST00000456385 CCR1P32246 355 aa10.15□□□□□ -0.78
CLIP4-208ENST00000456385 LIPAP38571 399 aa10.15□□□□□ -0.78
CLIP4-208ENST00000456385 ARL1P40616 181 aaPredicted RBP10.15□□□□□ -0.78
CLIP4-208ENST00000456385 CLK1P49759 484 aaKnown RBP10.15□□□□□ -0.78
CLIP4-208ENST00000456385 CLK3P49761 638 aaKnown RBP10.15□□□□□ -0.78
CLIP4-208ENST00000456385 CLCNKBP51801 687 aa10.15□□□□□ -0.78
CLIP4-208ENST00000456385 ZNF33AQ06730 810 aa10.15□□□□□ -0.78
CLIP4-208ENST00000456385 TRAF3Q13114 568 aa10.15□□□□□ -0.78
CLIP4-208ENST00000456385 DCAF4L1Q3SXM0 396 aa10.15□□□□□ -0.78
CLIP4-208ENST00000456385 SOWAHCQ53LP3 525 aaPredicted RBP10.15□□□□□ -0.78
CLIP4-208ENST00000456385 PRSS36Q5K4E3 855 aa10.15□□□□□ -0.78
CLIP4-208ENST00000456385 ATAD3CQ5T2N8 411 aa10.15□□□□□ -0.78
CLIP4-208ENST00000456385 SLC27A1Q6PCB7 646 aa10.15□□□□□ -0.78
CLIP4-208ENST00000456385 PAQR3Q6TCH7 311 aa10.15□□□□□ -0.78
CLIP4-208ENST00000456385 FKBP9P1Q75LS8 142 aa10.15□□□□□ -0.78
CLIP4-208ENST00000456385 DPP9Q86TI2 863 aa10.15□□□□□ -0.78
CLIP4-208ENST00000456385 OR52B6Q8NGF0 335 aa10.15□□□□□ -0.78
CLIP4-208ENST00000456385 OR6F1Q8NGZ6 308 aa10.15□□□□□ -0.78
CLIP4-208ENST00000456385 OR5K1Q8NHB7 308 aa10.15□□□□□ -0.78
CLIP4-208ENST00000456385 RHEBL1Q8TAI7 183 aa10.15□□□□□ -0.78
CLIP4-208ENST00000456385 KLHL5Q96PQ7 755 aa10.15□□□□□ -0.78
CLIP4-208ENST00000456385 REXO4Q9GZR2 422 aaKnown RBP10.15□□□□□ -0.78
CLIP4-208ENST00000456385 RNF167Q9H6Y7 350 aa10.15□□□□□ -0.78
CLIP4-208ENST00000456385 NT5MQ9NPB1 228 aa10.15□□□□□ -0.78
CLIP4-208ENST00000456385 DDX28Q9NUL7 540 aaKnown RBP10.15□□□□□ -0.78
CLIP4-208ENST00000456385 TPRKBQ9Y3C4 175 aa10.15□□□□□ -0.78
CLIP4-208ENST00000456385 GPSM3Q9Y4H4 160 aa10.15□□□□□ -0.78
CLIP4-208ENST00000456385 BRCA1P38398 1863 aaKnown RBP10.15□□□□□ -0.78
CLIP4-208ENST00000456385 PLXNA1Q9UIW2 1896 aa10.15□□□□□ -0.78
CLIP4-208ENST00000456385 FAM172BPA6NC97 362 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 MROH6A6NGR9 719 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 METTL15A6NJ78 407 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 SCO2O43819 266 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 KATNA1O75449 491 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 OR4F21O95013 312 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 F9P00740 461 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 PIRTP0C851 137 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 UROSP10746 265 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 SLC2A3P11169 496 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 PRKCAP17252 672 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 JUNDP17535 347 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 IGFBP5P24593 272 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 KCTD2Q14681 263 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 PON2Q15165 354 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 SLX4IPQ5VYV7 408 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 NXNL2Q5VZ03 156 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 LIMS2Q7Z4I7 341 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 PHACTR4Q8IZ21 702 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 CHPFQ8IZ52 775 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 KIAA1958Q8N8K9 716 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 PCED1BQ96HM7 432 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 DMRTB1Q96MA1 342 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 OR2B2Q9GZK3 357 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 ZNF221Q9UK13 617 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 EIF3LQ9Y262 564 aaKnown RBP10.15□□□□□ -0.79
CLIP4-208ENST00000456385 ORC6Q9Y5N6 252 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 ARL5AQ9Y689 179 aa10.15□□□□□ -0.79
CLIP4-208ENST00000456385 OR2A25A4D2G3 310 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 SAGE2PA6NJ88 616 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 ARVCFO00192 962 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 CXCR6O00574 342 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 KMOO15229 486 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 RGS10O43665 173 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 KERAO60938 352 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 RPS17P08708 135 aaKnown RBP10.14□□□□□ -0.79
CLIP4-208ENST00000456385 MRPL19P49406 292 aaKnown RBP10.14□□□□□ -0.79
CLIP4-208ENST00000456385 HTR6P50406 440 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 SCNN1GP51170 649 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 DSC2Q02487 901 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 PWP1Q13610 501 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 PLEKHG6Q3KR16 790 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 GTDC1Q4AE62 458 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 TPRG1LQ5T0D9 272 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 AGAP6Q5VW22 663 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 AHSA2Q719I0 299 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 ADHFE1Q8IWW8 467 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 C10orf111Q8N326 155 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 BEND7Q8N7W2 519 aaPredicted RBP10.14□□□□□ -0.79
CLIP4-208ENST00000456385 ASCC1Q8N9N2 400 aaKnown RBP10.14□□□□□ -0.79
CLIP4-208ENST00000456385 STAG3L4Q8TBR4 150 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 NCLNQ969V3 563 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 ZNF560Q96MR9 790 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 CCDC115Q96NT0 180 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 AGAP4Q96P64 663 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 TSPAN18Q96SJ8 248 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 MMP27Q9H306 513 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 TFB2MQ9H5Q4 396 aaKnown RBP10.14□□□□□ -0.79
CLIP4-208ENST00000456385 ARNT2Q9HBZ2 717 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 ATP13A1Q9HD20 1204 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 CNGB3Q9NQW8 809 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 PLSCR3Q9NRY6 295 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 ADPRHL2Q9NX46 363 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 FBXL12Q9NXK8 326 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.14□□□□□ -0.79
CLIP4-208ENST00000456385 DOCK1Q14185 1865 aa10.14□□□□□ -0.79
CLIP4-208ENST00000456385 COL1A2P08123 1366 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 NPEPPSL1A6NEC2 478 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 J3KR12 359 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 DSCR3O14972 297 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms