RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 MAGEB16A2A368 324 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 PMS2P1A4D2B8 440 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 TRABD2BA6NFA1 517 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 IQCF5A8MTL0 148 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 E5RI56 91 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 H3BMM5 538 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 TMX2-CTNND1H3BSU7 103 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 AGRPO00253 132 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 NIPSNAP2O75323 286 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 UBXN7O94888 489 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 ESR1P03372 595 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 TUBB4AP04350 444 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 APOA4P06727 396 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 PROS1P07225 676 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 TYRP1P17643 537 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 XRCC1P18887 633 aaPredicted RBP6.9□□□□□ -1.3
COMMD1-205ENST00000455659 RPS3P23396 243 aaKnown RBP eCLIP6.9□□□□□ -1.3
COMMD1-205ENST00000455659 NDUFS1P28331 727 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 CD1CP29017 333 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 ELK3P41970 407 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 GFERP55789 205 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 MPP1Q00013 466 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 EIF3IQ13347 325 aaKnown RBP6.9□□□□□ -1.3
COMMD1-205ENST00000455659 CAMK2BQ13554 666 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 KRT33BQ14525 404 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 FASTKD3Q14CZ7 662 aaKnown RBP6.9□□□□□ -1.3
COMMD1-205ENST00000455659 BRD3Q15059 726 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 ZNF658BQ4V348 819 aaPredicted RBP6.9□□□□□ -1.3
COMMD1-205ENST00000455659 SPANXN3Q5MJ09 141 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 CTSL3PQ5NE16 218 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 SNAP47Q5SQN1 464 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 HP1BP3Q5SSJ5 553 aaPredicted RBP6.9□□□□□ -1.3
COMMD1-205ENST00000455659 FOXR1Q6PIV2 292 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 NAPRTQ6XQN6 538 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 USP53Q70EK8 1073 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 CENPUQ71F23 418 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 OTOAQ7RTW8 1153 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 PIM3Q86V86 326 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 OOSP2Q86WS3 158 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 ANKMY2Q8IV38 441 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 DENND6AQ8IWF6 608 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 KRT222Q8N1A0 295 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 RCBTB1Q8NDN9 531 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 OR4D9Q8NGE8 314 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 GABPB2Q8TAK5 448 aaPredicted RBP6.9□□□□□ -1.3
COMMD1-205ENST00000455659 GSDMBQ8TAX9 411 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 CALML6Q8TD86 181 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 FAM136AQ96C01 138 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 LRRC39Q96DD0 335 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 CERS2Q96G23 380 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 SIGLEC10Q96LC7 697 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 CNTNAP3BQ96NU0 1288 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 EBNA1BP2Q99848 306 aaKnown RBP6.9□□□□□ -1.3
COMMD1-205ENST00000455659 DPYSL5Q9BPU6 564 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 ERP44Q9BS26 406 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 CNTNAP3Q9BZ76 1288 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 NRSN2Q9GZP1 204 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 P2RY12Q9H244 342 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 OR52A5Q9H2C5 316 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 CCDC68Q9H2F9 335 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 SEMA6CQ9H3T2 930 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 CCDC86Q9H6F5 360 aaKnown RBP6.9□□□□□ -1.3
COMMD1-205ENST00000455659 KIR3DX1Q9H7L2 352 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 SLC40A1Q9NP59 571 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 FBXO6Q9NRD1 293 aaPredicted RBP6.9□□□□□ -1.3
COMMD1-205ENST00000455659 INTS10Q9NVR2 710 aaKnown RBP6.9□□□□□ -1.3
COMMD1-205ENST00000455659 AKAP7Q9P0M2 348 aaPredicted RBP6.9□□□□□ -1.3
COMMD1-205ENST00000455659 TMEM9Q9P0T7 183 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 WHRNQ9P202 907 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 SLC17A6Q9P2U8 582 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 PISDQ9UG56 409 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 ZC3H7BQ9UGR2 993 aaKnown RBP6.9□□□□□ -1.3
COMMD1-205ENST00000455659 KLHL3Q9UH77 587 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 TSR3Q9UJK0 312 aaKnown RBP6.9□□□□□ -1.3
COMMD1-205ENST00000455659 ASF1AQ9Y294 204 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 CRYL1Q9Y2S2 319 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 AK5Q9Y6K8 562 aa6.9□□□□□ -1.3
COMMD1-205ENST00000455659 MGAQ8IWI9 3026 aa6.9□□□□□ -1.31
COMMD1-205ENST00000455659 IGHV5-10-1A0A0J9YXX1 117 aa6.89□□□□□ -1.31
COMMD1-205ENST00000455659 A0A1W2PNU3 283 aaPredicted RBP6.89□□□□□ -1.31
COMMD1-205ENST00000455659 ESYT3A0FGR9 886 aa6.89□□□□□ -1.31
COMMD1-205ENST00000455659 CTAGE15A4D2H0 777 aa6.89□□□□□ -1.31
COMMD1-205ENST00000455659 PLD2O14939 933 aa6.89□□□□□ -1.31
COMMD1-205ENST00000455659 HGSO14964 777 aaPredicted RBP6.89□□□□□ -1.31
COMMD1-205ENST00000455659 TP73O15350 636 aa6.89□□□□□ -1.31
COMMD1-205ENST00000455659 B4GAT1O43505 415 aa6.89□□□□□ -1.31
COMMD1-205ENST00000455659 RASSF9O75901 435 aa6.89□□□□□ -1.31
COMMD1-205ENST00000455659 RPN2P04844 631 aa6.89□□□□□ -1.31
COMMD1-205ENST00000455659 ITGA2BP08514 1039 aa6.89□□□□□ -1.31
COMMD1-205ENST00000455659 JMJD7P0C870 316 aa6.89□□□□□ -1.31
COMMD1-205ENST00000455659 CTAGE8P0CG41 777 aa6.89□□□□□ -1.31
COMMD1-205ENST00000455659 ERVK-10P10266 1014 aa6.89□□□□□ -1.31
COMMD1-205ENST00000455659 HGFP14210 728 aa6.89□□□□□ -1.31
COMMD1-205ENST00000455659 HOXB3P14651 431 aaPredicted RBP6.89□□□□□ -1.31
COMMD1-205ENST00000455659 AMD1P17707 334 aa6.89□□□□□ -1.31
COMMD1-205ENST00000455659 MPSTP25325 297 aa6.89□□□□□ -1.31
COMMD1-205ENST00000455659 PDHA2P29803 388 aa6.89□□□□□ -1.31
COMMD1-205ENST00000455659 LIMK2P53671 638 aa6.89□□□□□ -1.31
COMMD1-205ENST00000455659 ADARP55265 1226 aaKnown RBP6.89□□□□□ -1.31
COMMD1-205ENST00000455659 PPP1CAP62136 330 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms