RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 C9orf16Q9BUW7 83 aa11□□□□□ -0.65
DDR1-240ENST00000454612 CDC14AQ9UNH5 594 aa11□□□□□ -0.65
DDR1-240ENST00000454612 RNF11Q9Y3C5 154 aa11□□□□□ -0.65
DDR1-240ENST00000454612 PCDHGA7Q9Y5G6 932 aa11□□□□□ -0.65
DDR1-240ENST00000454612 MKI67P46013 3256 aaKnown RBP11□□□□□ -0.65
DDR1-240ENST00000454612 KPNA5O15131 536 aa11□□□□□ -0.65
DDR1-240ENST00000454612 CCL16O15467 120 aa11□□□□□ -0.65
DDR1-240ENST00000454612 COCHO43405 550 aa11□□□□□ -0.65
DDR1-240ENST00000454612 ATP5BP06576 529 aaKnown RBP11□□□□□ -0.65
DDR1-240ENST00000454612 PABPC4LP0CB38 370 aaKnown RBP11□□□□□ -0.65
DDR1-240ENST00000454612 WASP42768 502 aa11□□□□□ -0.65
DDR1-240ENST00000454612 STC1P52823 247 aa11□□□□□ -0.65
DDR1-240ENST00000454612 OR4D2P58180 307 aa11□□□□□ -0.65
DDR1-240ENST00000454612 BNIP3Q12983 259 aa11□□□□□ -0.65
DDR1-240ENST00000454612 PARP15Q460N3 678 aa11□□□□□ -0.65
DDR1-240ENST00000454612 SPANXN4Q5MJ08 99 aa11□□□□□ -0.65
DDR1-240ENST00000454612 ASB9Q96DX5 294 aa11□□□□□ -0.65
DDR1-240ENST00000454612 TEX37Q96LM6 180 aa11□□□□□ -0.65
DDR1-240ENST00000454612 AARSD1Q9BTE6 412 aaKnown RBP11□□□□□ -0.65
DDR1-240ENST00000454612 MFSD1Q9H3U5 465 aa11□□□□□ -0.65
DDR1-240ENST00000454612 OSGEPL1Q9H4B0 414 aa11□□□□□ -0.65
DDR1-240ENST00000454612 CERS4Q9HA82 394 aa11□□□□□ -0.65
DDR1-240ENST00000454612 CLK4Q9HAZ1 481 aaKnown RBP11□□□□□ -0.65
DDR1-240ENST00000454612 LTB4R2Q9NPC1 389 aa11□□□□□ -0.65
DDR1-240ENST00000454612 A0A0G2JMZ2 1700 aa11□□□□□ -0.65
DDR1-240ENST00000454612 PNMA8CA0A1B0GUJ8 204 aa11□□□□□ -0.65
DDR1-240ENST00000454612 ZNF195O14628 629 aa11□□□□□ -0.65
DDR1-240ENST00000454612 SMAD6O43541 496 aaKnown RBP11□□□□□ -0.65
DDR1-240ENST00000454612 DFNA5O60443 496 aa11□□□□□ -0.65
DDR1-240ENST00000454612 APOA1P02647 267 aa11□□□□□ -0.65
DDR1-240ENST00000454612 RFX3P48380 749 aa11□□□□□ -0.65
DDR1-240ENST00000454612 CLK1P49759 484 aaKnown RBP11□□□□□ -0.65
DDR1-240ENST00000454612 NDST2P52849 883 aa11□□□□□ -0.65
DDR1-240ENST00000454612 RHDQ02161 417 aa11□□□□□ -0.65
DDR1-240ENST00000454612 SCAPQ12770 1279 aa11□□□□□ -0.65
DDR1-240ENST00000454612 GTF2H2Q13888 395 aa11□□□□□ -0.65
DDR1-240ENST00000454612 CHRNA6Q15825 494 aa11□□□□□ -0.65
DDR1-240ENST00000454612 USP41Q3LFD5 358 aa11□□□□□ -0.65
DDR1-240ENST00000454612 GTF2H2CQ6P1K8 395 aa11□□□□□ -0.65
DDR1-240ENST00000454612 ZNF549Q6P9A3 640 aa11□□□□□ -0.65
DDR1-240ENST00000454612 SYT12Q8IV01 421 aa11□□□□□ -0.65
DDR1-240ENST00000454612 WRAP53Q9BUR4 548 aaKnown RBP11□□□□□ -0.65
DDR1-240ENST00000454612 HIPK3Q9H422 1215 aa11□□□□□ -0.65
DDR1-240ENST00000454612 GSTO2Q9H4Y5 243 aa11□□□□□ -0.65
DDR1-240ENST00000454612 COMMD8Q9NX08 183 aa11□□□□□ -0.65
DDR1-240ENST00000454612 A0A0G2JN53 185 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 A0A1W2PPW3 197 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 LDB2O43679 373 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 PRAMEF12O95522 483 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 PRIM2P49643 509 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 TPTEP56180 551 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 ZXDBP98169 803 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 AARS2Q5JTZ9 985 aaKnown RBP10.99□□□□□ -0.65
DDR1-240ENST00000454612 RSPO2Q6UXX9 243 aaPredicted RBP10.99□□□□□ -0.65
DDR1-240ENST00000454612 NEK10Q6ZWH5 1172 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 DNAJB7Q7Z6W7 309 aaPredicted RBP10.99□□□□□ -0.65
DDR1-240ENST00000454612 TSPAN33Q86UF1 283 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 NT5C3BQ969T7 300 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 FEM1AQ9BSK4 669 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 OSBPL11Q9BXB4 747 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 ABCB8Q9NUT2 735 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 MKS1Q9NXB0 559 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 LOC100506127A0A0U1RQW1 187 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 LOC730098B7Z3J9 87 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 ARHGEF9O43307 516 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 ASNA1O43681 348 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 OPN1SWP03999 348 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 RPIAP49247 311 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 TGFBIQ15582 683 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 TTLL9Q3SXZ7 439 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 RFLNAQ6ZTI6 216 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 GET4Q7L5D6 327 aaPredicted RBP10.99□□□□□ -0.65
DDR1-240ENST00000454612 RTN4RL1Q86UN2 441 aaPredicted RBP10.99□□□□□ -0.65
DDR1-240ENST00000454612 TRAPPC5Q8IUR0 188 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 ELMOD1Q8N336 334 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 PSD4Q8NDX1 1056 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 MDGA1Q8NFP4 955 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 MYO19Q96H55 970 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 PANX1Q96RD7 426 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 SLC22A12Q96S37 553 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 C1QTNF1Q9BXJ1 281 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 CXorf21Q9HAI6 301 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.99□□□□□ -0.65
DDR1-240ENST00000454612 PRKAB1Q9Y478 270 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 CACNA1CQ13936 2221 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 ATG2BQ96BY7 2078 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 A0A087WXM4 84 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 MGAT4DA6NG13 374 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 HTRA2O43464 458 aaPredicted RBP10.99□□□□□ -0.65
DDR1-240ENST00000454612 CLDN11O75508 207 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 INHAP05111 366 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 BMP1P13497 986 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 ZNF135P52742 658 aaPredicted RBP10.99□□□□□ -0.65
DDR1-240ENST00000454612 ACOX1Q15067 660 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 DUS1LQ6P1R4 473 aaKnown RBP10.99□□□□□ -0.65
DDR1-240ENST00000454612 FAM171BQ6P995 826 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 KDELC1Q6UW63 502 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 UBE2R2Q712K3 238 aaPredicted RBP10.99□□□□□ -0.65
DDR1-240ENST00000454612 P3H2Q8IVL5 708 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 ADGRG2Q8IZP9 1017 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms