RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 CXCL12P48061 93 aa10.54□□□□□ -0.72
PKP4-206ENST00000452162 PSMD8P48556 350 aa10.54□□□□□ -0.72
PKP4-206ENST00000452162 GRB7Q14451 532 aa10.54□□□□□ -0.72
PKP4-206ENST00000452162 ANGPT1Q15389 498 aa10.54□□□□□ -0.72
PKP4-206ENST00000452162 MYLK3Q32MK0 819 aa10.54□□□□□ -0.72
PKP4-206ENST00000452162 MAMSTRQ6ZN01 415 aa10.54□□□□□ -0.72
PKP4-206ENST00000452162 FUNDC1Q8IVP5 155 aa10.54□□□□□ -0.72
PKP4-206ENST00000452162 RBFAQ8N0V3 343 aa10.54□□□□□ -0.72
PKP4-206ENST00000452162 CBARPQ8N350 705 aaPredicted RBP10.54□□□□□ -0.72
PKP4-206ENST00000452162 ZNF557Q8N988 423 aaPredicted RBP10.54□□□□□ -0.72
PKP4-206ENST00000452162 LKAAEAR1Q8TD35 194 aa10.54□□□□□ -0.72
PKP4-206ENST00000452162 ERLEC1Q96DZ1 483 aa10.54□□□□□ -0.72
PKP4-206ENST00000452162 TUBGCP5Q96RT8 1024 aa10.54□□□□□ -0.72
PKP4-206ENST00000452162 IER2Q9BTL4 223 aa10.54□□□□□ -0.72
PKP4-206ENST00000452162 NUSAP1Q9BXS6 441 aaKnown RBP10.54□□□□□ -0.72
PKP4-206ENST00000452162 CLPBQ9H078 707 aa10.54□□□□□ -0.72
PKP4-206ENST00000452162 ASB8Q9H765 288 aa10.54□□□□□ -0.72
PKP4-206ENST00000452162 NUDT4Q9NZJ9 180 aa10.54□□□□□ -0.72
PKP4-206ENST00000452162 CCDC167Q9P0B6 97 aa10.54□□□□□ -0.72
PKP4-206ENST00000452162 POLG2Q9UHN1 485 aa10.54□□□□□ -0.72
PKP4-206ENST00000452162 ZNF225Q9UK10 706 aa10.54□□□□□ -0.72
PKP4-206ENST00000452162 APPL1Q9UKG1 709 aa10.54□□□□□ -0.72
PKP4-206ENST00000452162 ASB1Q9Y576 335 aa10.54□□□□□ -0.72
PKP4-206ENST00000452162 PRSS21Q9Y6M0 314 aa10.54□□□□□ -0.72
PKP4-206ENST00000452162 FANCMQ8IYD8 2048 aa10.54□□□□□ -0.72
PKP4-206ENST00000452162 GLYATL1P3A0A0U1RQE8 302 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 E2F3O00716 465 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 CFLARO15519 480 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 ATG13O75143 517 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 MLYCDO95822 493 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 ACRV1P26436 265 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 CCR3P51677 355 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 CLNS1AP54105 237 aaKnown RBP10.53□□□□□ -0.72
PKP4-206ENST00000452162 PSME3P61289 254 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 SNRPD1P62314 119 aaKnown RBP10.53□□□□□ -0.72
PKP4-206ENST00000452162 CDC16Q13042 620 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 TGFBIQ15582 683 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 CHRNA6Q15825 494 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 LYPLAL1Q5VWZ2 237 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 PTRHD1Q6GMV3 140 aaKnown RBP10.53□□□□□ -0.72
PKP4-206ENST00000452162 SBSNQ6UWP8 590 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 TMEM92Q6UXU6 159 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 TSPAN33Q86UF1 283 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 CHPFQ8IZ52 775 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 SNX31Q8N9S9 440 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 HIPK4Q8NE63 616 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 OR9I1Q8NGQ6 314 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 WFIKKN2Q8TEU8 576 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 ZNF184Q99676 751 aaPredicted RBP10.53□□□□□ -0.72
PKP4-206ENST00000452162 SLC25A23Q9BV35 468 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 GIMAP2Q9UG22 337 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 EIF2B4Q9UI10 523 aaKnown RBP10.53□□□□□ -0.72
PKP4-206ENST00000452162 GNPTGQ9UJJ9 305 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 MMP17Q9ULZ9 603 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 BTRCQ9Y297 605 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 PPIL1Q9Y3C6 166 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 GOLGA8CPA6NN73 597 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 AGAP14A8MT82 685 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 H0Y858 1186 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 SNX2O60749 519 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 VPS4BO75351 444 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 ESRRBO95718 433 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 PRR35P0CG20 571 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 UGT1A6P19224 532 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 POLR2EP19388 210 aaKnown RBP10.53□□□□□ -0.72
PKP4-206ENST00000452162 UGT1A1P22309 533 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 UGT1A4P22310 534 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 ME2P23368 584 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 PRDX3P30048 256 aaKnown RBP10.53□□□□□ -0.72
PKP4-206ENST00000452162 UGT1A3P35503 534 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 UGT1A5P35504 534 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 SPAM1P38567 509 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 IL12RB1P42701 662 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 NUBP1P53384 320 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 STX1BP61266 288 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 CSTF1Q05048 431 aaKnown RBP10.53□□□□□ -0.72
PKP4-206ENST00000452162 TCF15Q12870 199 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 DMC1Q14565 340 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 ZNF234Q14588 700 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 EIF4HQ15056 248 aaKnown RBP10.53□□□□□ -0.72
PKP4-206ENST00000452162 GPR33Q49SQ1 333 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 ANO7Q6IWH7 933 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 C8orf82Q6P1X6 216 aaPredicted RBP10.53□□□□□ -0.72
PKP4-206ENST00000452162 PAOXQ6QHF9 649 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 CRTC1Q6UUV9 634 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 HACD2Q6Y1H2 254 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 SYT13Q7L8C5 426 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 ADAMTSL2Q86TH1 951 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 DDIASQ8IXT1 998 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 UCMAQ8WVF2 138 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 HGH1Q9BTY7 390 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 PRMT8Q9NR22 394 aaPredicted RBP10.53□□□□□ -0.72
PKP4-206ENST00000452162 CD274Q9NZQ7 290 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 THAP10Q9P2Z0 257 aaPredicted RBP10.53□□□□□ -0.72
PKP4-206ENST00000452162 HECAQ9UBI9 543 aaPredicted RBP10.53□□□□□ -0.72
PKP4-206ENST00000452162 ADAMTS6Q9UKP5 1117 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 LRCH1Q9Y2L9 728 aa10.53□□□□□ -0.72
PKP4-206ENST00000452162 E7ENX8 843 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 K7ESF4 209 aa10.52□□□□□ -0.73
PKP4-206ENST00000452162 TRIM38O00635 465 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms