RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 SPOCD1Q6ZMY3 1216 aa9.89□□□□□ -0.83
LINC01004-202ENST00000450686 TRIM73Q86UV7 250 aa9.89□□□□□ -0.83
LINC01004-202ENST00000450686 CCDC50Q8IVM0 306 aa9.89□□□□□ -0.83
LINC01004-202ENST00000450686 APLFQ8IW19 511 aaPredicted RBP9.89□□□□□ -0.83
LINC01004-202ENST00000450686 RBM12BQ8IXT5 1001 aaKnown RBP9.89□□□□□ -0.83
LINC01004-202ENST00000450686 D2HGDHQ8N465 521 aa9.89□□□□□ -0.83
LINC01004-202ENST00000450686 Q8NA96 180 aa9.89□□□□□ -0.83
LINC01004-202ENST00000450686 DDHD1Q8NEL9 900 aa9.89□□□□□ -0.83
LINC01004-202ENST00000450686 OR4E2Q8NGC2 313 aa9.89□□□□□ -0.83
LINC01004-202ENST00000450686 OR1L3Q8NH93 324 aa9.89□□□□□ -0.83
LINC01004-202ENST00000450686 ZNF501Q96CX3 271 aaPredicted RBP9.89□□□□□ -0.83
LINC01004-202ENST00000450686 C19orf60Q96EN9 201 aa9.89□□□□□ -0.83
LINC01004-202ENST00000450686 NUDT9Q9BW91 350 aa9.89□□□□□ -0.83
LINC01004-202ENST00000450686 RAB33BQ9H082 229 aa9.89□□□□□ -0.83
LINC01004-202ENST00000450686 ING2Q9H160 280 aa9.89□□□□□ -0.83
LINC01004-202ENST00000450686 ACSS2Q9NR19 701 aa9.89□□□□□ -0.83
LINC01004-202ENST00000450686 SEMA5BQ9P283 1151 aa9.89□□□□□ -0.83
LINC01004-202ENST00000450686 SLC24A2Q9UI40 661 aa9.89□□□□□ -0.83
LINC01004-202ENST00000450686 VPS4AQ9UN37 437 aa9.89□□□□□ -0.83
LINC01004-202ENST00000450686 FARSAQ9Y285 508 aaKnown RBP9.89□□□□□ -0.83
LINC01004-202ENST00000450686 GSAPA4D1B5 854 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 TMEM150CB9EJG8 249 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 GOLGA6L19H0YKK7 550 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 SPOPO43791 374 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 SORBS2O94875 1100 aaKnown RBP9.88□□□□□ -0.83
LINC01004-202ENST00000450686 MT-ND3P03897 115 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 CTSBP07858 339 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 HLA-DPA1P20036 260 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 MSH3P20585 1137 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 CDKN1CP49918 316 aaPredicted RBP9.88□□□□□ -0.83
LINC01004-202ENST00000450686 RPS15P62841 145 aaKnown RBP9.88□□□□□ -0.83
LINC01004-202ENST00000450686 TUBB4BP68371 445 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 HSD11B2P80365 405 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 ACY1Q03154 408 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 ATP1A4Q13733 1029 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 TUBB2AQ13885 445 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 SLC14A2Q15849 920 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 DEFB110Q30KQ9 67 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 ODF2Q5BJF6 829 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 PLEKHS1Q5SXH7 462 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 METRNLQ641Q3 311 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 DESI1Q6ICB0 168 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 FAM198BQ6UWH4 519 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 PID1Q7Z2X4 250 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 SYVN1Q86TM6 617 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 OOSP2Q86WS3 158 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 CFAP206Q8IYR0 622 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 FDCSPQ8NFU4 85 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 OR4K2Q8NGD2 314 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 OR13C4Q8NGS5 318 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 ADAMTS17Q8TE56 1095 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 DNAJC7Q99615 494 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 TUBB2BQ9BVA1 445 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 HEMGNQ9BXL5 484 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 XKR8Q9H6D3 395 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 CASS4Q9NQ75 786 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 KCND1Q9NSA2 647 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 RSPH14Q9UHP6 348 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 SNX7Q9UNH6 387 aa9.88□□□□□ -0.83
LINC01004-202ENST00000450686 TEP1Q99973 2627 aaKnown RBP9.87□□□□□ -0.83
LINC01004-202ENST00000450686 hCG_1818297A0A087WSY0 165 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 MGAT4DA6NG13 374 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 ZNF487B1APH4 448 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 TCP11X1B4DZS4 312 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 MEN1O00255 615 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 BTN3A3O00478 584 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 STX7O15400 261 aaKnown RBP9.87□□□□□ -0.83
LINC01004-202ENST00000450686 HCRTR1O43613 425 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 CAPN1P07384 714 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 SLC35G4P0C7Q5 338 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 ST6GAL1P15907 406 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 ZFXP17010 805 aaPredicted RBP9.87□□□□□ -0.83
LINC01004-202ENST00000450686 CDH3P22223 829 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 PREPP48147 710 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 SPARCL1Q14515 664 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 SLC9A5Q14940 896 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 INPP5JQ15735 1006 aaPredicted RBP9.87□□□□□ -0.83
LINC01004-202ENST00000450686 TAZQ16635 292 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 KYNUQ16719 465 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 ZNF789Q5FWF6 425 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 FHL5Q5TD97 284 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 C1orf189Q5VU69 101 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 ZNF787Q6DD87 383 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 ARMC6Q6NXE6 501 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 LIAT1Q6ZQX7 453 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 DSELQ8IZU8 1212 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 ZBTB2Q8N680 514 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 RBMXL3Q8N7X1 1067 aaKnown RBP9.87□□□□□ -0.83
LINC01004-202ENST00000450686 PHC3Q8NDX5 983 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 OR8K1Q8NGG5 319 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 ZNF398Q8TD17 642 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 BRSK1Q8TDC3 778 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 KRT35Q92764 455 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 CLIP3Q96DZ5 547 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 QKIQ96PU8 341 aaKnown RBP eCLIP9.87□□□□□ -0.837e-7■■■■□ 19.9
LINC01004-202ENST00000450686 ZCCHC2Q9C0B9 1178 aaKnown RBP9.87□□□□□ -0.83
LINC01004-202ENST00000450686 ASB8Q9H765 288 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 KIR3DX1Q9H7L2 352 aa9.87□□□□□ -0.83
LINC01004-202ENST00000450686 NHEJ1Q9H9Q4 299 aaPredicted RBP9.87□□□□□ -0.83
LINC01004-202ENST00000450686 ABHD10Q9NUJ1 306 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms