RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 MYBL2P10244 700 aa16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 FGF3P11487 239 aaPredicted RBP16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 SLC2A4P14672 509 aa16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 PHBP35232 272 aa16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 PMS2P54278 862 aa16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 PRAMEP78395 509 aa16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 GPLD1P80108 840 aa16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 VAC14Q08AM6 782 aa16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 SQSTM1Q13501 440 aa16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 COL9A2Q14055 689 aaPredicted RBP16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 CLPPQ16740 277 aaPredicted RBP16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 ANKRD20A4Q4UJ75 823 aa16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 TMEM71Q6P5X7 295 aa16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 TMEM135Q86UB9 458 aa16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 OR4K2Q8NGD2 314 aa16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 PMEPA1Q969W9 287 aa16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 CFAP36Q96G28 342 aa16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 PKNOX2Q96KN3 472 aa16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 C9orf72Q96LT7 481 aa16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 CPNE7Q9UBL6 633 aa16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 SSUH2Q9Y2M2 353 aa16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 KCTD3Q9Y597 815 aa16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 FAM169AQ9Y6X4 670 aa16.72■□□□□ 0.27
PRPF40A-204ENST00000450303 KIR2DS5A0A0G2JLQ3 304 aa16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 A0A0G2JNG1 304 aa16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 GLYATL1P3A0A0U1RQE8 302 aa16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 TEX51A0A1B0GUA7 166 aa16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 PDZK1P1A8MUH7 402 aa16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 GPR89AB7ZAQ6 455 aa16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 KIR2DS3K7RE56 304 aa16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 DUX1O43812 170 aa16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 FAM153BP0C7A2 387 aa16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 GPR89BP0CG08 455 aa16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 THRAP10827 490 aa16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 RPL10P27635 214 aaKnown RBP16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 NMBRP28336 390 aa16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 CSTF2P33240 577 aaKnown RBP eCLIP16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 CLCNKAP51800 687 aa16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 ZNF140P52738 457 aaPredicted RBP16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 GTF2H3Q13889 308 aa16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 KIR2DS5Q14953 304 aa16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 TERF2Q15554 542 aa16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 FAM153CQ494X1 144 aa16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 CCDC81Q6ZN84 652 aa16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 TRAPPC5Q8IUR0 188 aa16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 MREGQ8N565 214 aa16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 RASGEF1AQ8N9B8 481 aa16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 SH3KBP1Q96B97 665 aa16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 CDC42EP4Q9H3Q1 356 aaKnown RBP16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 OCIAD1Q9NX40 245 aa16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 ZNF624Q9P2J8 865 aaPredicted RBP16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 KLHL3Q9UH77 587 aa16.71■□□□□ 0.27
PRPF40A-204ENST00000450303 AHCTF1Q8WYP5 2266 aa16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 CCDC78A2IDD5 438 aa16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 OR5K4A6NMS3 321 aa16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 GOLGA8KD6RF30 607 aa16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 GAPDHSO14556 408 aaPredicted RBP16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 HGSO14964 777 aaPredicted RBP16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 EFSO43281 561 aa16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 SLC19A1P41440 591 aa16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 UBE2IP63279 158 aaKnown RBP16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 TMPRSS15P98073 1019 aa16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 TRA2AQ13595 282 aaKnown RBP eCLIP16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 FASTKD3Q14CZ7 662 aaKnown RBP16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 KIAA1614Q5VZ46 1190 aa16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 KIAA0930Q6ICG6 404 aaPredicted RBP16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 C3orf62Q6ZUJ4 267 aa16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 C11orf96Q7Z7L8 435 aa16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 IGDCC3Q8IVU1 814 aa16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 TRIM48Q8IWZ4 208 aa16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 AGGF1Q8N302 714 aaeCLIP16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 OR13C4Q8NGS5 318 aa16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 GSDMBQ8TAX9 411 aa16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 NAT14Q8WUY8 206 aa16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 JPH3Q8WXH2 748 aaPredicted RBP16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 SLC39A7Q92504 469 aa16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 MFSD3Q96ES6 412 aa16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 CDKN2AIPNLQ96HQ2 116 aa16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 DNAJC1Q96KC8 554 aaKnown RBP16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 CCNL2Q96S94 520 aaPredicted RBP16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 DPYSL5Q9BPU6 564 aa16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 TIMM29Q9BSF4 260 aa16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 VPS37BQ9H9H4 285 aa16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 TREX1Q9NSU2 369 aa16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 SLC30A1Q9Y6M5 507 aa16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 SDK2Q58EX2 2172 aa16.7■□□□□ 0.26
PRPF40A-204ENST00000450303 ZNF106Q9H2Y7 1883 aaKnown RBP16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 EFCAB7A8K855 629 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 H3BQF6 201 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 H7C0S8 307 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 ATXN7O15265 892 aaPredicted RBP16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 VIPP01282 170 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 LIPCP11150 499 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 BRAFP15056 766 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 TYRP1P17643 537 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 IDSP22304 550 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 PSMA3P25788 255 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 STX2P32856 288 aa16.69■□□□□ 0.26
PRPF40A-204ENST00000450303 CTSCP53634 463 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms