RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 ETF1P62495 437 aaKnown RBP14.25□□□□□ -0.13
USP39-206ENST00000448971 SRSF6Q13247 344 aaKnown RBP14.25□□□□□ -0.13
USP39-206ENST00000448971 EIF3IQ13347 325 aaKnown RBP14.25□□□□□ -0.13
USP39-206ENST00000448971 CLCA4Q14CN2 919 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 PLCL1Q15111 1095 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 CLPPQ16740 277 aaPredicted RBP14.25□□□□□ -0.13
USP39-206ENST00000448971 SYTL3Q4VX76 610 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 IZUMO3Q5VZ72 239 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 DUS1LQ6P1R4 473 aaKnown RBP14.25□□□□□ -0.13
USP39-206ENST00000448971 CES3Q6UWW8 571 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 XKR5Q6UX68 686 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 PACS1Q6VY07 963 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 TMEM26Q6ZUK4 368 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 RAB11FIP2Q7L804 512 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 TMPRSS9Q7Z410 1059 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 SLITRK4Q8IW52 837 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 FBXO39Q8N4B4 442 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 MCUQ8NE86 351 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 GPR150Q8NGU9 434 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 SLCO2A1Q92959 643 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 ZNF669Q96BR6 464 aaPredicted RBP14.25□□□□□ -0.13
USP39-206ENST00000448971 MFSD3Q96ES6 412 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 CCDC74BQ96LY2 380 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 C12orf66Q96MD2 445 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 COG4Q9H9E3 785 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 TREX1Q9NSU2 369 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 AKAP7Q9P0M2 348 aaPredicted RBP14.25□□□□□ -0.13
USP39-206ENST00000448971 ZNF624Q9P2J8 865 aaPredicted RBP14.25□□□□□ -0.13
USP39-206ENST00000448971 IL17BQ9UHF5 180 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 PCYOX1Q9UHG3 505 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 LOXL2Q9Y4K0 774 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 CFAP20Q9Y6A4 193 aaKnown RBP14.25□□□□□ -0.13
USP39-206ENST00000448971 DNALI1O14645 258 aaPredicted RBP14.24□□□□□ -0.13
USP39-206ENST00000448971 OR56A5P0C7T3 313 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 JMJD7P0C870 316 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 MTHFD1P11586 935 aaKnown RBP14.24□□□□□ -0.13
USP39-206ENST00000448971 MPSTP25325 297 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 NFATC3Q12968 1075 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 BOP1Q14137 746 aaKnown RBP14.24□□□□□ -0.13
USP39-206ENST00000448971 GPR18Q14330 331 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 SEMA3AQ14563 771 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 RPE65Q16518 533 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 RNASEH2BQ5TBB1 312 aaKnown RBP14.24□□□□□ -0.13
USP39-206ENST00000448971 METRNLQ641Q3 311 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 ZNF449Q6P9G9 518 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 SYDE1Q6ZW31 735 aaPredicted RBP14.24□□□□□ -0.13
USP39-206ENST00000448971 CAND1Q86VP6 1230 aaKnown RBP14.24□□□□□ -0.13
USP39-206ENST00000448971 JAMLQ86YT9 394 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 RBM12BQ8IXT5 1001 aaKnown RBP14.24□□□□□ -0.13
USP39-206ENST00000448971 CFAP206Q8IYR0 622 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 MPP5Q8N3R9 675 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 LILRA3Q8N6C8 439 aaPredicted RBP14.24□□□□□ -0.13
USP39-206ENST00000448971 NAT8LQ8N9F0 302 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 NCSTNQ92542 709 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 ELMO1Q92556 727 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 C16orf45Q96MC5 204 aaPredicted RBP14.24□□□□□ -0.13
USP39-206ENST00000448971 CMKLR1Q99788 373 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 DPYSL5Q9BPU6 564 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 TRIM51Q9BSJ1 452 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 CCM2Q9BSQ5 444 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 KIFC1Q9BW19 673 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 SEMA6CQ9H3T2 930 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 EPB41L1Q9H4G0 881 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 STARD5Q9NSY2 213 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 KLHL3Q9UH77 587 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 ACSL5Q9ULC5 683 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 MAD1L1Q9Y6D9 718 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 PRSS21Q9Y6M0 314 aa14.24□□□□□ -0.13
USP39-206ENST00000448971 PRAMEF33A0A0G2JMD5 474 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 C17orf113A0A1B0GUU1 675 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 IFRD1O00458 451 aaPredicted RBP14.23□□□□□ -0.13
USP39-206ENST00000448971 TERTO14746 1132 aaKnown RBP14.23□□□□□ -0.13
USP39-206ENST00000448971 NVLO15381 856 aaKnown RBP14.23□□□□□ -0.13
USP39-206ENST00000448971 CD3EAPO15446 510 aaKnown RBP14.23□□□□□ -0.13
USP39-206ENST00000448971 TTI1O43156 1089 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 OR1I1O60431 355 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 VAPBO95292 243 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 ITGB2P05107 769 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 GSTM1P09488 218 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 THRAP10827 490 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 HGFP14210 728 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 AMD1P17707 334 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 PTGIRP43119 386 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 TTPAP49638 278 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 GSTM4Q03013 218 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 ZFP36L1Q07352 338 aaKnown RBP14.23□□□□□ -0.13
USP39-206ENST00000448971 KRT33BQ14525 404 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 SNAP47Q5SQN1 464 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 KIAA0930Q6ICG6 404 aaPredicted RBP14.23□□□□□ -0.13
USP39-206ENST00000448971 PRICKLE2Q7Z3G6 844 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 PCGF5Q86SE9 256 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 LDB1Q86U70 411 aaPredicted RBP14.23□□□□□ -0.13
USP39-206ENST00000448971 RCBTB1Q8NDN9 531 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 OR4D9Q8NGE8 314 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 SGSM3Q96HU1 749 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 RMDN2Q96LZ7 410 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 KRT12Q99456 494 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 TSSK1BQ9BXA7 367 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 UCK1Q9HA47 277 aa14.23□□□□□ -0.13
USP39-206ENST00000448971 TMEM9Q9P0T7 183 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms