RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 SMARCAL1Q9NZC9 954 aa19.21■□□□□ 0.67
VCP-203ENST00000448530 RARRES3Q9UL19 164 aa19.21■□□□□ 0.67
VCP-203ENST00000448530 PIKFYVEQ9Y2I7 2098 aa19.2■□□□□ 0.66
VCP-203ENST00000448530 CCDC78A2IDD5 438 aa19.2■□□□□ 0.66
VCP-203ENST00000448530 J3QKU1 62 aa19.2■□□□□ 0.66
VCP-203ENST00000448530 NKX2-8O15522 239 aa19.2■□□□□ 0.66
VCP-203ENST00000448530 SPAG6O75602 509 aa19.2■□□□□ 0.66
VCP-203ENST00000448530 MT-ND3P03897 115 aa19.2■□□□□ 0.66
VCP-203ENST00000448530 GSTM1P09488 218 aa19.2■□□□□ 0.66
VCP-203ENST00000448530 ZNF28P17035 718 aa19.2■□□□□ 0.66
VCP-203ENST00000448530 MSNP26038 577 aaKnown RBP19.2■□□□□ 0.66
VCP-203ENST00000448530 CCR10P46092 362 aa19.2■□□□□ 0.66
VCP-203ENST00000448530 HSD11B2P80365 405 aa19.2■□□□□ 0.66
VCP-203ENST00000448530 GSTM4Q03013 218 aa19.2■□□□□ 0.66
VCP-203ENST00000448530 SNX1Q13596 522 aa19.2■□□□□ 0.66
VCP-203ENST00000448530 BPHLQ86WA6 291 aaPredicted RBP19.2■□□□□ 0.66
VCP-203ENST00000448530 CCDC89Q8N998 374 aa19.2■□□□□ 0.66
VCP-203ENST00000448530 ACVR1CQ8NER5 493 aa19.2■□□□□ 0.66
VCP-203ENST00000448530 C1orf54Q8WWF1 131 aa19.2■□□□□ 0.66
VCP-203ENST00000448530 STARD8Q92502 1023 aa19.2■□□□□ 0.66
VCP-203ENST00000448530 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.2■□□□□ 0.665e-7■■■■■ 55
VCP-203ENST00000448530 RNF31Q96EP0 1072 aa19.2■□□□□ 0.66
VCP-203ENST00000448530 ETNK1Q9HBU6 452 aa19.2■□□□□ 0.66
VCP-203ENST00000448530 SEMA5BQ9P283 1151 aa19.2■□□□□ 0.66
VCP-203ENST00000448530 IL17BQ9UHF5 180 aa19.2■□□□□ 0.66
VCP-203ENST00000448530 PCDHB3Q9Y5E6 796 aa19.2■□□□□ 0.66
VCP-203ENST00000448530 HEATR9A2RTY3 570 aa19.19■□□□□ 0.66
VCP-203ENST00000448530 MROH6A6NGR9 719 aa19.19■□□□□ 0.66
VCP-203ENST00000448530 QSOX1O00391 747 aa19.19■□□□□ 0.66
VCP-203ENST00000448530 AP2A2O94973 939 aa19.19■□□□□ 0.66
VCP-203ENST00000448530 TCN2P20062 427 aa19.19■□□□□ 0.66
VCP-203ENST00000448530 DLSTP36957 453 aa19.19■□□□□ 0.66
VCP-203ENST00000448530 CDC20Q12834 499 aa19.19■□□□□ 0.66
VCP-203ENST00000448530 RPA4Q13156 261 aa19.19■□□□□ 0.66
VCP-203ENST00000448530 KCNAB1Q14722 419 aa19.19■□□□□ 0.66
VCP-203ENST00000448530 OASLQ15646 514 aaKnown RBP19.19■□□□□ 0.66
VCP-203ENST00000448530 CCDC38Q502W7 563 aa19.19■□□□□ 0.66
VCP-203ENST00000448530 TMTC4Q5T4D3 741 aa19.19■□□□□ 0.66
VCP-203ENST00000448530 PRICKLE2Q7Z3G6 844 aa19.19■□□□□ 0.66
VCP-203ENST00000448530 CARFQ8N187 725 aa19.19■□□□□ 0.66
VCP-203ENST00000448530 CLDN19Q8N6F1 224 aa19.19■□□□□ 0.66
VCP-203ENST00000448530 OR4E2Q8NGC2 313 aa19.19■□□□□ 0.66
VCP-203ENST00000448530 LCN9Q8WX39 176 aa19.19■□□□□ 0.66
VCP-203ENST00000448530 FCRL4Q96PJ5 515 aa19.19■□□□□ 0.66
VCP-203ENST00000448530 TTC1Q99614 292 aa19.19■□□□□ 0.66
VCP-203ENST00000448530 ADNPQ9H2P0 1102 aa19.19■□□□□ 0.66
VCP-203ENST00000448530 SRMSQ9H3Y6 488 aa19.19■□□□□ 0.66
VCP-203ENST00000448530 FGF21Q9NSA1 209 aa19.19■□□□□ 0.66
VCP-203ENST00000448530 GEMIN8Q9NWZ8 242 aaKnown RBP19.19■□□□□ 0.66
VCP-203ENST00000448530 SOHLH2Q9NX45 425 aa19.19■□□□□ 0.66
VCP-203ENST00000448530 MATN2O00339 956 aa19.18■□□□□ 0.66
VCP-203ENST00000448530 SLC28A2O43868 658 aa19.18■□□□□ 0.66
VCP-203ENST00000448530 ZBTB11O95625 1053 aaPredicted RBP19.18■□□□□ 0.66
VCP-203ENST00000448530 CCDC175P0C221 793 aa19.18■□□□□ 0.66
VCP-203ENST00000448530 EBLN1P0CF75 366 aa19.18■□□□□ 0.66
VCP-203ENST00000448530 PRSS56P0CW18 603 aa19.18■□□□□ 0.66
VCP-203ENST00000448530 FOLR1P15328 257 aa19.18■□□□□ 0.66
VCP-203ENST00000448530 POLR2CP19387 275 aaPredicted RBP19.18■□□□□ 0.66
VCP-203ENST00000448530 NSG1P42857 185 aa19.18■□□□□ 0.66
VCP-203ENST00000448530 ARCN1P48444 511 aaKnown RBP19.18■□□□□ 0.66
VCP-203ENST00000448530 CD151P48509 253 aa19.18■□□□□ 0.66
VCP-203ENST00000448530 ITIH4Q14624 930 aa19.18■□□□□ 0.66
VCP-203ENST00000448530 DBN1Q16643 649 aa19.18■□□□□ 0.66
VCP-203ENST00000448530 MEI1Q5TIA1 1274 aa19.18■□□□□ 0.66
VCP-203ENST00000448530 C16orf46Q6P387 395 aa19.18■□□□□ 0.66
VCP-203ENST00000448530 PIANPQ8IYJ0 282 aa19.18■□□□□ 0.66
VCP-203ENST00000448530 MVB12BQ9H7P6 319 aa19.18■□□□□ 0.66
VCP-203ENST00000448530 LZTFL1Q9NQ48 299 aa19.18■□□□□ 0.66
VCP-203ENST00000448530 RAB6BQ9NRW1 208 aa19.18■□□□□ 0.66
VCP-203ENST00000448530 STARD5Q9NSY2 213 aa19.18■□□□□ 0.66
VCP-203ENST00000448530 KCND3Q9UK17 655 aa19.18■□□□□ 0.66
VCP-203ENST00000448530 CROTQ9UKG9 612 aa19.18■□□□□ 0.66
VCP-203ENST00000448530 PADI1Q9ULC6 663 aa19.18■□□□□ 0.66
VCP-203ENST00000448530 GSAPA4D1B5 854 aa19.17■□□□□ 0.66
VCP-203ENST00000448530 GOLGA6L3A6NEY3 463 aa19.17■□□□□ 0.66
VCP-203ENST00000448530 F8W8V4 182 aa19.17■□□□□ 0.66
VCP-203ENST00000448530 MAP3K7O43318 606 aa19.17■□□□□ 0.66
VCP-203ENST00000448530 KATNA1O75449 491 aa19.17■□□□□ 0.66
VCP-203ENST00000448530 FTH1P02794 183 aa19.17■□□□□ 0.66
VCP-203ENST00000448530 CDH3P22223 829 aa19.17■□□□□ 0.66
VCP-203ENST00000448530 POLE2P56282 527 aa19.17■□□□□ 0.66
VCP-203ENST00000448530 LYPLAL1Q5VWZ2 237 aa19.17■□□□□ 0.66
VCP-203ENST00000448530 OR52A5Q9H2C5 316 aa19.17■□□□□ 0.66
VCP-203ENST00000448530 PAK5Q9P286 719 aa19.17■□□□□ 0.66
VCP-203ENST00000448530 SPTA1P02549 2419 aa19.17■□□□□ 0.66
VCP-203ENST00000448530 TLN1Q9Y490 2541 aaKnown RBP19.16■□□□□ 0.66
VCP-203ENST00000448530 CCDC162PA2VCL2 907 aa19.16■□□□□ 0.66
VCP-203ENST00000448530 LIN7AO14910 233 aaPredicted RBP19.16■□□□□ 0.66
VCP-203ENST00000448530 NRDCO43847 1150 aa19.16■□□□□ 0.66
VCP-203ENST00000448530 SUN1O94901 812 aa19.16■□□□□ 0.66
VCP-203ENST00000448530 APRTP07741 180 aa19.16■□□□□ 0.66
VCP-203ENST00000448530 ADRA1DP25100 572 aa19.16■□□□□ 0.66
VCP-203ENST00000448530 PSMA3P25788 255 aa19.16■□□□□ 0.66
VCP-203ENST00000448530 PREPP48147 710 aa19.16■□□□□ 0.66
VCP-203ENST00000448530 KPNA2P52292 529 aaKnown RBP19.16■□□□□ 0.66
VCP-203ENST00000448530 KCNAB2Q13303 367 aa19.16■□□□□ 0.66
VCP-203ENST00000448530 DEFB109BQ30KR1 87 aa19.16■□□□□ 0.66
VCP-203ENST00000448530 SYTL3Q4VX76 610 aa19.16■□□□□ 0.66
VCP-203ENST00000448530 CRTC2Q53ET0 693 aaPredicted RBP19.16■□□□□ 0.66
VCP-203ENST00000448530 PWWP2BQ6NUJ5 590 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms