RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	BDH2	Q9BUT1	245 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	KATNBL1	Q9H079	304 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	NTN4	Q9HB63	628 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	HPS4	Q9NQG7	708 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	QPCTL	Q9NXS2	382 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	ERVK-11	Q9UQG0	969 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	PCDHGA11	Q9Y5H2	935 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	SNX5	Q9Y5X3	404 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	BCAS1	O75363	584 aa	Predicted RBP	12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	ODC1	P11926	461 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	RPL17	P18621	184 aa	Known RBP	12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	JAK1	P23458	1154 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	SCNN1A	P37088	669 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	MLLT6	P55198	1093 aa	Predicted RBP	12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	RAD51	Q06609	339 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	CCNYL2	Q5T2Q4	361 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	ANGPTL8	Q6UXH0	198 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	C8orf59	Q8N0T1	100 aa	Predicted RBP	12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	PROKR1	Q8TCW9	393 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	FBXO32	Q969P5	355 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	HOPX	Q9BPY8	73 aa	Predicted RBP	12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	AMBRA1	Q9C0C7	1298 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	FKBP14	Q9NWM8	211 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	ZMAT5	Q9UDW3	170 aa	Known RBP	12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	TRMT6	Q9UJA5	497 aa	Known RBP	12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	CAB39	Q9Y376	341 aa	Predicted RBP	12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	WDR90	Q96KV7	1748 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	GON4L	Q3T8J9	2241 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	PSMD3	O43242	534 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	MYO1D	O94832	1006 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	CHRM5	P08912	532 aa	Predicted RBP	12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	MC4R	P32245	332 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	RAB15	P59190	212 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	RPL26	P61254	145 aa	Known RBP	12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	EPS8	Q12929	822 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	TRIP4	Q15650	581 aa	Predicted RBP	12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	BORA	Q6PGQ7	559 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	FAM151B	Q6UXP7	276 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	GPRIN3	Q6ZVF9	776 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	PAGE2	Q7Z2X7	111 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	PHYKPL	Q8IUZ5	450 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	STAG3L4	Q8TBR4	150 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	ATOH8	Q96SQ7	321 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	BOC	Q9BWV1	1114 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	SDR39U1	Q9NRG7	319 aa	Predicted RBP	12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	LATS2	Q9NRM7	1088 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	ARMC1	Q9NVT9	282 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	TAS2R13	Q9NYV9	303 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	FBXO10	Q9UK96	956 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	SQOR	Q9Y6N5	450 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	MYLK	Q15746	1914 aa		12.34	□□□□□ -0.43
DDR1-238	ENST00000446312	LOC100506127	A0A0U1RQW1	187 aa		12.33	□□□□□ -0.43
DDR1-238	ENST00000446312	SMIM35	A0A1B0GVV1	85 aa		12.33	□□□□□ -0.43
DDR1-238	ENST00000446312	KRBA1	A5PL33	1030 aa		12.33	□□□□□ -0.43
DDR1-238	ENST00000446312		A8MV72	311 aa	Predicted RBP	12.33	□□□□□ -0.43
DDR1-238	ENST00000446312	SNAP91	O60641	907 aa		12.33	□□□□□ -0.43
DDR1-238	ENST00000446312	SEC22B	O75396	215 aa		12.33	□□□□□ -0.43
DDR1-238	ENST00000446312	CCL23	P55773	120 aa		12.33	□□□□□ -0.43
DDR1-238	ENST00000446312	TAF10	Q12962	218 aa		12.33	□□□□□ -0.43
DDR1-238	ENST00000446312	ZNF829	Q3KNS6	432 aa	Predicted RBP	12.33	□□□□□ -0.43
DDR1-238	ENST00000446312	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	12.33	□□□□□ -0.43
DDR1-238	ENST00000446312	BROX	Q5VW32	411 aa		12.33	□□□□□ -0.43
DDR1-238	ENST00000446312	ADCK1	Q86TW2	530 aa		12.33	□□□□□ -0.43
DDR1-238	ENST00000446312	CLIP4	Q8N3C7	705 aa		12.33	□□□□□ -0.43
DDR1-238	ENST00000446312	LMNTD1	Q8N9Z9	388 aa		12.33	□□□□□ -0.43
DDR1-238	ENST00000446312	FUBP1	Q96AE4	644 aa	Known RBP	12.33	□□□□□ -0.43
DDR1-238	ENST00000446312	ROPN1L	Q96C74	230 aa		12.33	□□□□□ -0.43
DDR1-238	ENST00000446312	PRKD2	Q9BZL6	878 aa		12.33	□□□□□ -0.43
DDR1-238	ENST00000446312	RNF167	Q9H6Y7	350 aa		12.33	□□□□□ -0.43
DDR1-238	ENST00000446312	ADARB2	Q9NS39	739 aa	Known RBP	12.33	□□□□□ -0.43
DDR1-238	ENST00000446312	ABCC13	Q9NSE7	274 aa		12.33	□□□□□ -0.43
DDR1-238	ENST00000446312	AQP12B	A6NM10	295 aa		12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	PRSS23	O95084	383 aa		12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	NTRK1	P04629	796 aa		12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	ATXN1L	P0C7T5	689 aa	Known RBP	12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	HSMCR30	P0CW71	290 aa		12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	HCAR3	P49019	387 aa		12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	GATM	P50440	423 aa		12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	NUDT6	P53370	316 aa		12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	EIF2B5	Q13144	721 aa	Known RBP	12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	STK11	Q15831	433 aa		12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	USP41	Q3LFD5	358 aa		12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	SULT1C3	Q6IMI6	304 aa		12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	GDF6	Q6KF10	455 aa	Predicted RBP	12.33	□□□□□ -0.44
DDR1-238	ENST00000446312		Q6ZSR9	355 aa		12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	AQP12A	Q8IXF9	295 aa		12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	CACTIN-AS1	Q8N1I8	211 aa		12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	OR2T12	Q8NG77	320 aa		12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	LILRB4	Q8NHJ6	448 aa		12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	ARRDC2	Q8TBH0	407 aa		12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	EBPL	Q9BY08	206 aa		12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	ZYG11B	Q9C0D3	744 aa		12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	C6orf62	Q9GZU0	229 aa	Predicted RBP	12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	IRF2BPL	Q9H1B7	796 aa		12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	ACTR8	Q9H981	624 aa		12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	SPC25	Q9HBM1	224 aa		12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	MARCH2	Q9P0N8	246 aa		12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	LEF1	Q9UJU2	399 aa	Predicted RBP	12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	PADI3	Q9ULW8	664 aa		12.33	□□□□□ -0.44
DDR1-238	ENST00000446312	MYO10	Q9HD67	2058 aa		12.33	□□□□□ -0.44

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