RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 FAM92BQ6ZTR7 304 aa18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 BPHLQ86WA6 291 aaPredicted RBP18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 OOSP2Q86WS3 158 aa18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 CACNA2D3Q8IZS8 1091 aa18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 NLGN4XQ8N0W4 816 aa18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 IL22RA1Q8N6P7 574 aa18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 ACVR1CQ8NER5 493 aa18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 NLGN4YQ8NFZ3 816 aaPredicted RBP18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 CTRCQ99895 268 aa18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 MVB12BQ9H7P6 319 aa18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 APMAPQ9HDC9 416 aa18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 WDR70Q9NW82 654 aa18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 HRASLS2Q9NWW9 162 aa18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 SLC2A6Q9UGQ3 507 aa18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 PCDHGA4Q9Y5G9 962 aa18.36■□□□□ 0.53
ATPAF2-201ENST00000444058 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 CCDC78A2IDD5 438 aa18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 TLCD2A6NGC4 264 aa18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 OR51F1A6NGY5 319 aa18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 MATN2O00339 956 aa18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 ZSCAN12O43309 604 aa18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 GOT2P00505 430 aaKnown RBP18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 OR56A5P0C7T3 313 aa18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 FGF5P12034 268 aa18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 TPSB2P20231 275 aa18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 KCNJ1P48048 391 aa18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 SEPHS1P49903 392 aa18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 PRAMEP78395 509 aa18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 BASP1P80723 227 aaKnown RBP18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 FOXM1Q08050 763 aa18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 TPSAB1Q15661 275 aa18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 TAF1BQ53T94 588 aaPredicted RBP18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 AARS2Q5JTZ9 985 aaKnown RBP18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 DUS1LQ6P1R4 473 aaKnown RBP18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 VASH2Q86V25 355 aa18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 ZNF778Q96MU6 729 aa18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 FCRL4Q96PJ5 515 aa18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 NAP1L3Q99457 506 aaPredicted RBP18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 TFB2MQ9H5Q4 396 aaKnown RBP18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 BFARQ9NZS9 450 aa18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 SMG1Q96Q15 3661 aaKnown RBP18.35■□□□□ 0.53
ATPAF2-201ENST00000444058 STK17BO94768 372 aa18.34■□□□□ 0.53
ATPAF2-201ENST00000444058 DLGAP3O95886 979 aa18.34■□□□□ 0.53
ATPAF2-201ENST00000444058 MAGEA6P43360 314 aa18.34■□□□□ 0.53
ATPAF2-201ENST00000444058 SRSF6Q13247 344 aaKnown RBP18.34■□□□□ 0.53
ATPAF2-201ENST00000444058 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.34■□□□□ 0.53
ATPAF2-201ENST00000444058 FASTKD1Q53R41 847 aaKnown RBP18.34■□□□□ 0.53
ATPAF2-201ENST00000444058 DNTTIP2Q5QJE6 756 aaKnown RBP18.34■□□□□ 0.53
ATPAF2-201ENST00000444058 ZNF534Q76KX8 674 aa18.34■□□□□ 0.53
ATPAF2-201ENST00000444058 REXO1L1PQ8IX06 675 aa18.34■□□□□ 0.53
ATPAF2-201ENST00000444058 ESX1Q8N693 406 aa18.34■□□□□ 0.53
ATPAF2-201ENST00000444058 OR6P1Q8NGX9 317 aa18.34■□□□□ 0.53
ATPAF2-201ENST00000444058 JPH3Q8WXH2 748 aaPredicted RBP18.34■□□□□ 0.53
ATPAF2-201ENST00000444058 OR6C1Q96RD1 312 aa18.34■□□□□ 0.53
ATPAF2-201ENST00000444058 EFHD1Q9BUP0 239 aa18.34■□□□□ 0.53
ATPAF2-201ENST00000444058 CHRAC1Q9NRG0 131 aa18.34■□□□□ 0.53
ATPAF2-201ENST00000444058 TREX1Q9NSU2 369 aa18.34■□□□□ 0.53
ATPAF2-201ENST00000444058 PRSS21Q9Y6M0 314 aa18.34■□□□□ 0.53
ATPAF2-201ENST00000444058 IGHV5-51A0A0C4DH38 117 aa18.33■□□□□ 0.52
ATPAF2-201ENST00000444058 PDHA2P29803 388 aa18.33■□□□□ 0.52
ATPAF2-201ENST00000444058 PPP1CAP62136 330 aa18.33■□□□□ 0.52
ATPAF2-201ENST00000444058 SH3BP2P78314 561 aa18.33■□□□□ 0.52
ATPAF2-201ENST00000444058 HSD11B2P80365 405 aa18.33■□□□□ 0.52
ATPAF2-201ENST00000444058 ACY1Q03154 408 aa18.33■□□□□ 0.52
ATPAF2-201ENST00000444058 ABHD18Q0P651 414 aa18.33■□□□□ 0.52
ATPAF2-201ENST00000444058 PRKAA1Q13131 559 aa18.33■□□□□ 0.52
ATPAF2-201ENST00000444058 BOP1Q14137 746 aaKnown RBP18.33■□□□□ 0.52
ATPAF2-201ENST00000444058 CYP1B1Q16678 543 aa18.33■□□□□ 0.52
ATPAF2-201ENST00000444058 KIAA1614Q5VZ46 1190 aa18.33■□□□□ 0.52
ATPAF2-201ENST00000444058 ARMC6Q6NXE6 501 aa18.33■□□□□ 0.52
ATPAF2-201ENST00000444058 LRRC8BQ6P9F7 803 aa18.33■□□□□ 0.52
ATPAF2-201ENST00000444058 MICALCLQ6ZW33 695 aa18.33■□□□□ 0.52
ATPAF2-201ENST00000444058 MPP5Q8N3R9 675 aa18.33■□□□□ 0.52
ATPAF2-201ENST00000444058 LCN9Q8WX39 176 aa18.33■□□□□ 0.52
ATPAF2-201ENST00000444058 TFGQ92734 400 aaPredicted RBP18.33■□□□□ 0.52
ATPAF2-201ENST00000444058 FERD3LQ96RJ6 166 aa18.33■□□□□ 0.52
ATPAF2-201ENST00000444058 MAP3K3Q99759 626 aa18.33■□□□□ 0.52
ATPAF2-201ENST00000444058 MRM3Q9HC36 420 aaKnown RBP18.33■□□□□ 0.52
ATPAF2-201ENST00000444058 PDE7BQ9NP56 450 aa18.33■□□□□ 0.52
ATPAF2-201ENST00000444058 ANAPC5Q9UJX4 755 aa18.33■□□□□ 0.52
ATPAF2-201ENST00000444058 UBA6A0AVT1 1052 aaPredicted RBP18.32■□□□□ 0.52
ATPAF2-201ENST00000444058 SLC5A10A0PJK1 596 aa18.32■□□□□ 0.52
ATPAF2-201ENST00000444058 OR6C74A6NCV1 312 aa18.32■□□□□ 0.52
ATPAF2-201ENST00000444058 ZBTB11O95625 1053 aaPredicted RBP18.32■□□□□ 0.52
ATPAF2-201ENST00000444058 WT1P19544 449 aaPredicted RBP18.32■□□□□ 0.52
ATPAF2-201ENST00000444058 PREPP48147 710 aa18.32■□□□□ 0.52
ATPAF2-201ENST00000444058 TTPAP49638 278 aa18.32■□□□□ 0.52
ATPAF2-201ENST00000444058 SESN2P58004 480 aaPredicted RBP18.32■□□□□ 0.52
ATPAF2-201ENST00000444058 SARNPP82979 210 aaKnown RBP18.32■□□□□ 0.52
ATPAF2-201ENST00000444058 TIPARPQ7Z3E1 657 aaKnown RBP18.32■□□□□ 0.52
ATPAF2-201ENST00000444058 PPP1R3BQ86XI6 285 aa18.32■□□□□ 0.52
ATPAF2-201ENST00000444058 D2HGDHQ8N465 521 aa18.32■□□□□ 0.52
ATPAF2-201ENST00000444058 SIDT2Q8NBJ9 832 aaKnown RBP18.32■□□□□ 0.52
ATPAF2-201ENST00000444058 OR4E2Q8NGC2 313 aa18.32■□□□□ 0.52
ATPAF2-201ENST00000444058 ELMO1Q92556 727 aa18.32■□□□□ 0.52
ATPAF2-201ENST00000444058 KIAA1143Q96AT1 154 aaPredicted RBP18.32■□□□□ 0.52
ATPAF2-201ENST00000444058 KIFC1Q9BW19 673 aa18.32■□□□□ 0.52
ATPAF2-201ENST00000444058 TSSK1BQ9BXA7 367 aa18.32■□□□□ 0.52
ATPAF2-201ENST00000444058 SLC12A9Q9BXP2 914 aa18.32■□□□□ 0.52
ATPAF2-201ENST00000444058 ULBP3Q9BZM4 244 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms