RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 FAM153CQ494X1 144 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 RBM20Q5T481 1227 aaKnown RBP15.66■□□□□ 0.1
USP39-205ENST00000442708 KIAA0408Q6ZU52 694 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 TMPRSS9Q7Z410 1059 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 PDZD3Q86UT5 571 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 RELL1Q8IUW5 271 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 GSPT2Q8IYD1 628 aaKnown RBP15.66■□□□□ 0.1
USP39-205ENST00000442708 PHC3Q8NDX5 983 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 ACVR1CQ8NER5 493 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 GIMAP7Q8NHV1 300 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 JPH3Q8WXH2 748 aaPredicted RBP15.66■□□□□ 0.1
USP39-205ENST00000442708 CXorf40BQ96DE9 158 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 NDNQ99608 321 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 NRTNQ99748 197 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 MCMBPQ9BTE3 642 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 AARSD1Q9BTE6 412 aaKnown RBP15.66■□□□□ 0.1
USP39-205ENST00000442708 IMP3Q9NV31 184 aaKnown RBP15.66■□□□□ 0.1
USP39-205ENST00000442708 VPS9D1Q9Y2B5 631 aa15.66■□□□□ 0.1
USP39-205ENST00000442708 KMT2BQ9UMN6 2715 aaPredicted RBP15.66■□□□□ 0.1
USP39-205ENST00000442708 IGHV1OR21-1A0A087WYE8 117 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 FAM159BA6NKW6 160 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 H3BMM5 538 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 HYAL3O43820 417 aaPredicted RBP15.65■□□□□ 0.1
USP39-205ENST00000442708 SLCO2B1O94956 709 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 SLU7O95391 586 aaKnown RBP15.65■□□□□ 0.1
USP39-205ENST00000442708 RPLP0P05388 317 aaKnown RBP15.65■□□□□ 0.1
USP39-205ENST00000442708 GSTA2P09210 222 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 SPINK2P20155 84 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 CD1CP29017 333 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 PGGT1BP53609 377 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 CDKN2DP55273 166 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 CFHR1Q03591 330 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 FOXC1Q12948 553 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 GPR18Q14330 331 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 GBX1Q14549 363 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 EFTUD2Q15029 972 aaKnown RBP eCLIP15.65■□□□□ 0.13e-8■■□□□ 13.7
USP39-205ENST00000442708 SYTL3Q4VX76 610 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 CDCP2Q5VXM1 449 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 NKAIN2Q5VXU1 208 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 CYS1Q717R9 158 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 GALNT7Q86SF2 657 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 TRIM48Q8IWZ4 208 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 SLC22A15Q8IZD6 547 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 FBF1Q8TES7 1133 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 PANX3Q96QZ0 392 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 TSSK1BQ9BXA7 367 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 TBC1D10AQ9BXI6 508 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 LRRN3Q9H3W5 708 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 LATS2Q9NRM7 1088 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 POT1Q9NUX5 634 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 ZFATQ9P243 1243 aa15.65■□□□□ 0.1
USP39-205ENST00000442708 ATXN7L1Q9ULK2 861 aaPredicted RBP15.65■□□□□ 0.1
USP39-205ENST00000442708 FAM149AA5PLN7 773 aa15.64■□□□□ 0.09
USP39-205ENST00000442708 F8W8V4 182 aa15.64■□□□□ 0.09
USP39-205ENST00000442708 VIPP01282 170 aa15.64■□□□□ 0.09
USP39-205ENST00000442708 CHRM3P20309 590 aa15.64■□□□□ 0.09
USP39-205ENST00000442708 GPR3P46089 330 aa15.64■□□□□ 0.09
USP39-205ENST00000442708 CD151P48509 253 aa15.64■□□□□ 0.09
USP39-205ENST00000442708 E2F1Q01094 437 aa15.64■□□□□ 0.09
USP39-205ENST00000442708 BIRC2Q13490 618 aa15.64■□□□□ 0.09
USP39-205ENST00000442708 KBTBD12Q3ZCT8 623 aa15.64■□□□□ 0.09
USP39-205ENST00000442708 AMZ1Q400G9 498 aa15.64■□□□□ 0.09
USP39-205ENST00000442708 HES3Q5TGS1 186 aa15.64■□□□□ 0.09
USP39-205ENST00000442708 TMEM26Q6ZUK4 368 aa15.64■□□□□ 0.09
USP39-205ENST00000442708 STRA8Q7Z7C7 330 aa15.64■□□□□ 0.09
USP39-205ENST00000442708 PIM3Q86V86 326 aa15.64■□□□□ 0.09
USP39-205ENST00000442708 ZC3HC1Q86WB0 502 aaKnown RBP15.64■□□□□ 0.09
USP39-205ENST00000442708 SIDT2Q8NBJ9 832 aaKnown RBP15.64■□□□□ 0.09
USP39-205ENST00000442708 TMEM159Q96B96 161 aa15.64■□□□□ 0.09
USP39-205ENST00000442708 GPR21Q99679 349 aa15.64■□□□□ 0.09
USP39-205ENST00000442708 ABCG4Q9H172 646 aa15.64■□□□□ 0.09
USP39-205ENST00000442708 CDC42EP4Q9H3Q1 356 aaKnown RBP15.64■□□□□ 0.09
USP39-205ENST00000442708 SYNDIG1Q9H7V2 258 aa15.64■□□□□ 0.09
USP39-205ENST00000442708 KCNK4Q9NYG8 393 aa15.64■□□□□ 0.09
USP39-205ENST00000442708 OGFRQ9NZT2 677 aa15.64■□□□□ 0.09
USP39-205ENST00000442708 APOA4P06727 396 aa15.63■□□□□ 0.09
USP39-205ENST00000442708 ADRB1P08588 477 aa15.63■□□□□ 0.09
USP39-205ENST00000442708 CSF2RBP32927 897 aa15.63■□□□□ 0.09
USP39-205ENST00000442708 PDX1P52945 283 aa15.63■□□□□ 0.09
USP39-205ENST00000442708 ACSBG2Q5FVE4 666 aa15.63■□□□□ 0.09
USP39-205ENST00000442708 PLEKHS1Q5SXH7 462 aa15.63■□□□□ 0.09
USP39-205ENST00000442708 ZNF449Q6P9G9 518 aa15.63■□□□□ 0.09
USP39-205ENST00000442708 USP53Q70EK8 1073 aa15.63■□□□□ 0.09
USP39-205ENST00000442708 OTOAQ7RTW8 1153 aa15.63■□□□□ 0.09
USP39-205ENST00000442708 SLC26A11Q86WA9 606 aa15.63■□□□□ 0.09
USP39-205ENST00000442708 OR5AR1Q8NGP9 310 aa15.63■□□□□ 0.09
USP39-205ENST00000442708 GABPB2Q8TAK5 448 aaPredicted RBP15.63■□□□□ 0.09
USP39-205ENST00000442708 CD200R1Q8TD46 325 aa15.63■□□□□ 0.09
USP39-205ENST00000442708 ASZ1Q8WWH4 475 aa15.63■□□□□ 0.09
USP39-205ENST00000442708 TFGQ92734 400 aaPredicted RBP15.63■□□□□ 0.09
USP39-205ENST00000442708 KCNJ9Q92806 393 aa15.63■□□□□ 0.09
USP39-205ENST00000442708 ATXN7L3BQ96GX2 97 aa15.63■□□□□ 0.09
USP39-205ENST00000442708 SLC38A3Q99624 504 aa15.63■□□□□ 0.09
USP39-205ENST00000442708 NUDT22Q9BRQ3 303 aa15.63■□□□□ 0.09
USP39-205ENST00000442708 TXLNGYQ9BZA5 131 aa15.63■□□□□ 0.09
USP39-205ENST00000442708 UCK1Q9HA47 277 aa15.63■□□□□ 0.09
USP39-205ENST00000442708 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.63■□□□□ 0.09
USP39-205ENST00000442708 TSR3Q9UJK0 312 aaKnown RBP15.63■□□□□ 0.09
USP39-205ENST00000442708 KLK13Q9UKR3 277 aa15.63■□□□□ 0.09
USP39-205ENST00000442708 RUVBL2Q9Y230 463 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms