RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 AURKAO14965 403 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 NKX2-8O15522 239 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 MTX2O75431 263 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 AGTP01019 485 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 ATP1B2P14415 290 aaPredicted RBP7.59□□□□□ -1.19
CD44-211ENST00000442151 ITGB6P18564 788 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 STIP1P31948 543 aaKnown RBP7.59□□□□□ -1.19
CD44-211ENST00000442151 DRG2P55039 364 aaKnown RBP7.59□□□□□ -1.19
CD44-211ENST00000442151 CYP4F2P78329 520 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 OTUD4Q01804 1114 aaKnown RBP7.59□□□□□ -1.19
CD44-211ENST00000442151 KLRB1Q12918 225 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 TUBB3Q13509 450 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 SKIDA1Q1XH10 827 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 C4orf22Q6V702 233 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 FAM92BQ6ZTR7 304 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 PEX26Q7Z412 305 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 C11orf96Q7Z7L8 435 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 ATCAYQ86WG3 371 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 ZNF547Q8IVP9 402 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 TEX19Q8NA77 164 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 ACVR1CQ8NER5 493 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 ACTL9Q8TC94 416 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 DENND1AQ8TEH3 1009 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 STYXQ8WUJ0 223 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 CPT1BQ92523 772 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 SLC41A2Q96JW4 573 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 FERD3LQ96RJ6 166 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 TBL1YQ9BQ87 522 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 DPH2Q9BQC3 489 aaPredicted RBP7.59□□□□□ -1.19
CD44-211ENST00000442151 LRRC40Q9H9A6 602 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 C1GALT1Q9NS00 363 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 IMP3Q9NV31 184 aaKnown RBP7.59□□□□□ -1.19
CD44-211ENST00000442151 ZDHHC3Q9NYG2 299 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 OGFRQ9NZT2 677 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 SCHIP1Q9P0W5 487 aaPredicted RBP7.59□□□□□ -1.19
CD44-211ENST00000442151 POLG2Q9UHN1 485 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 CROTQ9UKG9 612 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 PCDHGB7Q9Y5F8 929 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 ZFC3H1O60293 1989 aaKnown RBP7.59□□□□□ -1.19
CD44-211ENST00000442151 OR2AG2A6NM03 316 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 OR52A4PA6NMU1 304 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 ARHGAP6O43182 974 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 CPNE3O75131 537 aaKnown RBP7.59□□□□□ -1.19
CD44-211ENST00000442151 CREG1O75629 220 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 FTH1P02794 183 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 PRKAR1AP10644 381 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 BRAFP15056 766 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 AGXTP21549 392 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 PBLDP30039 288 aaPredicted RBP7.59□□□□□ -1.19
CD44-211ENST00000442151 CASRP41180 1078 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 LMAN1P49257 510 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 GFERP55789 205 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 TUBB4BP68371 445 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 SRSF6Q13247 344 aaKnown RBP7.59□□□□□ -1.19
CD44-211ENST00000442151 DNASE1L3Q13609 305 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 TUBB2AQ13885 445 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 NLRP9Q7RTR0 991 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 TIPARPQ7Z3E1 657 aaKnown RBP7.59□□□□□ -1.19
CD44-211ENST00000442151 SYVN1Q86TM6 617 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 D2HGDHQ8N465 521 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 GALNT6Q8NCL4 622 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 N4BP2L2Q92802 583 aaPredicted RBP7.59□□□□□ -1.19
CD44-211ENST00000442151 OXNAD1Q96HP4 312 aaPredicted RBP7.59□□□□□ -1.19
CD44-211ENST00000442151 LRFN5Q96NI6 719 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 IP6K3Q96PC2 410 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 TUBB2BQ9BVA1 445 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 TWSG1Q9GZX9 223 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 WWP1Q9H0M0 922 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 SRMSQ9H3Y6 488 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 KIR3DX1Q9H7L2 352 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 APMAPQ9HDC9 416 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 LHX9Q9NQ69 397 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 IMPACTQ9P2X3 320 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 PCYT1BQ9Y5K3 369 aaPredicted RBP7.59□□□□□ -1.19
CD44-211ENST00000442151 MRFAP1Q9Y605 127 aa7.59□□□□□ -1.19
CD44-211ENST00000442151 FLNBO75369 2602 aaKnown RBP7.58□□□□□ -1.2
CD44-211ENST00000442151 HELZ2Q9BYK8 2649 aaKnown RBP7.58□□□□□ -1.2
CD44-211ENST00000442151 COL6A6A6NMZ7 2263 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 OR6C74A6NCV1 312 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 AGAP14A8MT82 685 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 LIN7AO14910 233 aaPredicted RBP7.58□□□□□ -1.2
CD44-211ENST00000442151 PJA2O43164 708 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 RFPL1O75677 317 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 RPN2P04844 631 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 RAB40ALP0C0E4 278 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 CDH3P22223 829 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 ADRA1AP35348 466 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 CHRNA4P43681 627 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 LEPRP48357 1165 aaKnown RBP7.58□□□□□ -1.2
CD44-211ENST00000442151 ARSDP51689 593 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 VAV2P52735 878 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 NFE2L1Q14494 772 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 ITIH4Q14624 930 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 TCTN3Q6NUS6 607 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 CERS6Q6ZMG9 384 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 B4GALNT4Q76KP1 1039 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 TAS2R42Q7RTR8 314 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 TMEM126BQ8IUX1 230 aa7.58□□□□□ -1.2
CD44-211ENST00000442151 APLFQ8IW19 511 aaPredicted RBP7.58□□□□□ -1.2
CD44-211ENST00000442151 NXPE1Q8N323 547 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms