RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 KIR3DX1Q9H7L2 352 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 CATSPERZQ9NTU4 200 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 HRASLS2Q9NWW9 162 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 MARCH4Q9P2E8 410 aaPredicted RBP13.4□□□□□ -0.26
LTBR-202ENST00000440421 ANAPC5Q9UJX4 755 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 PYCARDQ9ULZ3 195 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 SSUH2Q9Y2M2 353 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 HEBP2Q9Y5Z4 205 aa13.4□□□□□ -0.26
LTBR-202ENST00000440421 GOLGA6L10A0A0M3HER8 536 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 STMND1H3BQB6 276 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 GOLGA8MH3BSY2 632 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 QSOX1O00391 747 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 CD3EAPO15446 510 aaKnown RBP13.39□□□□□ -0.27
LTBR-202ENST00000440421 NDUFS1P28331 727 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 CSE1LP55060 971 aaKnown RBP13.39□□□□□ -0.27
LTBR-202ENST00000440421 GNG11P61952 73 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 SH3BP2P78314 561 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 SARNPP82979 210 aaKnown RBP13.39□□□□□ -0.27
LTBR-202ENST00000440421 CDK16Q00536 496 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 RPA4Q13156 261 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 SYTL3Q4VX76 610 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 MANEAQ5SRI9 462 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 ARMC6Q6NXE6 501 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 CERS6Q6ZMG9 384 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 PRSS42Q7Z5A4 293 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 OOSP2Q86WS3 158 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 DTX1Q86Y01 620 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 OTUD6BQ8N6M0 293 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 OR4E2Q8NGC2 313 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 CPT1BQ92523 772 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 MFSD3Q96ES6 412 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 RAB33BQ9H082 229 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 ZNF768Q9H5H4 540 aaKnown RBP13.39□□□□□ -0.27
LTBR-202ENST00000440421 FBXO8Q9NRD0 319 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 TREX1Q9NSU2 369 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 SIDT1Q9NXL6 827 aaKnown RBP13.39□□□□□ -0.27
LTBR-202ENST00000440421 EPHA6Q9UF33 1036 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 FAM208BQ5VWN6 2430 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 PTPRQQ9UMZ3 2332 aa13.39□□□□□ -0.27
LTBR-202ENST00000440421 SDK2Q58EX2 2172 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 PIKFYVEQ9Y2I7 2098 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 NBEAQ8NFP9 2946 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 ZFYVE26Q68DK2 2539 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 IGHV5-51A0A0C4DH38 117 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 OR5K3A6NET4 321 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 IQCF5A8MTL0 148 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.38□□□□□ -0.27
LTBR-202ENST00000440421 LIN7AO14910 233 aaPredicted RBP13.38□□□□□ -0.27
LTBR-202ENST00000440421 POLR1CO15160 346 aaPredicted RBP13.38□□□□□ -0.27
LTBR-202ENST00000440421 TOX3O15405 576 aaPredicted RBP13.38□□□□□ -0.27
LTBR-202ENST00000440421 EFSO43281 561 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 TMEM63AO94886 807 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 VAPBO95292 243 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 GSTM1P09488 218 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 POLR2CP19387 275 aaPredicted RBP13.38□□□□□ -0.27
LTBR-202ENST00000440421 PPARGP37231 505 aaPredicted RBP13.38□□□□□ -0.27
LTBR-202ENST00000440421 GSTM4Q03013 218 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 PRKG2Q13237 762 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 AARS2Q5JTZ9 985 aaKnown RBP13.38□□□□□ -0.27
LTBR-202ENST00000440421 DNTTIP2Q5QJE6 756 aaKnown RBP13.38□□□□□ -0.27
LTBR-202ENST00000440421 CASC4Q6P4E1 433 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 CEACAM20Q6UY09 585 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 MPP5Q8N3R9 675 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 ACVR1CQ8NER5 493 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 ZFPM2Q8WW38 1151 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 LCN9Q8WX39 176 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 TFGQ92734 400 aaPredicted RBP13.38□□□□□ -0.27
LTBR-202ENST00000440421 NKD1Q969G9 470 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 SGSM3Q96HU1 749 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 ELMO2Q96JJ3 720 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 CAPZA3Q96KX2 299 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 TEFMQ96QE5 360 aaKnown RBP13.38□□□□□ -0.27
LTBR-202ENST00000440421 OR6C1Q96RD1 312 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 NRTNQ99748 197 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 MAP3K3Q99759 626 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 HGH1Q9BTY7 390 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 KIFC1Q9BW19 673 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 SOX13Q9UN79 622 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 NEU2Q9Y3R4 380 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 ZFHX4Q86UP3 3567 aa13.38□□□□□ -0.27
LTBR-202ENST00000440421 TEX51A0A1B0GUA7 166 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 UBA6A0AVT1 1052 aaPredicted RBP13.37□□□□□ -0.27
LTBR-202ENST00000440421 GOLGA8KD6RF30 607 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 F8W8V4 182 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 GOLGA8TH3BQL2 631 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 K7ENP7 123 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 CES2O00748 559 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 RAD1O60671 282 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 TCP1P17987 556 aaKnown RBP13.37□□□□□ -0.27
LTBR-202ENST00000440421 MAGEA6P43360 314 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 CD151P48509 253 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 FNTAP49354 379 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 TTPAP49638 278 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 ARL4DP49703 201 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 ATP1A2P50993 1020 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 PPP1R7Q15435 360 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 SOWAHCQ53LP3 525 aaPredicted RBP13.37□□□□□ -0.27
LTBR-202ENST00000440421 KIAA1614Q5VZ46 1190 aa13.37□□□□□ -0.27
LTBR-202ENST00000440421 INO80CQ6PI98 192 aaPredicted RBP13.37□□□□□ -0.27
LTBR-202ENST00000440421 FBXO38Q6PIJ6 1188 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms