RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 LATS2Q9NRM7 1088 aa20.21■□□□□ 0.83
CPNE1-219ENST00000440240 FEZ2Q9UHY8 353 aaPredicted RBP20.21■□□□□ 0.83
CPNE1-219ENST00000440240 TFR2Q9UP52 801 aa20.21■□□□□ 0.83
CPNE1-219ENST00000440240 BTRCQ9Y297 605 aa20.21■□□□□ 0.83
CPNE1-219ENST00000440240 MACROD2A1Z1Q3 448 aa20.2■□□□□ 0.82
CPNE1-219ENST00000440240 KCNN4O15554 427 aa20.2■□□□□ 0.82
CPNE1-219ENST00000440240 SGTAO43765 313 aa20.2■□□□□ 0.82
CPNE1-219ENST00000440240 ATP1B2P14415 290 aaPredicted RBP20.2■□□□□ 0.82
CPNE1-219ENST00000440240 NR1D1P20393 614 aa20.2■□□□□ 0.82
CPNE1-219ENST00000440240 ITGALP20701 1170 aa20.2■□□□□ 0.82
CPNE1-219ENST00000440240 PSMB4P28070 264 aa20.2■□□□□ 0.82
CPNE1-219ENST00000440240 PRLHRP49683 370 aa20.2■□□□□ 0.82
CPNE1-219ENST00000440240 GSDMDP57764 484 aa20.2■□□□□ 0.82
CPNE1-219ENST00000440240 GPR33Q49SQ1 333 aa20.2■□□□□ 0.82
CPNE1-219ENST00000440240 DARS2Q6PI48 645 aaKnown RBP20.2■□□□□ 0.82
CPNE1-219ENST00000440240 SARM1Q6SZW1 724 aa20.2■□□□□ 0.82
CPNE1-219ENST00000440240 SNX20Q7Z614 316 aa20.2■□□□□ 0.82
CPNE1-219ENST00000440240 ATCAYQ86WG3 371 aa20.2■□□□□ 0.82
CPNE1-219ENST00000440240 NXPE1Q8N323 547 aa20.2■□□□□ 0.82
CPNE1-219ENST00000440240 ACVR1CQ8NER5 493 aa20.2■□□□□ 0.82
CPNE1-219ENST00000440240 OR4E2Q8NGC2 313 aa20.2■□□□□ 0.82
CPNE1-219ENST00000440240 HM13Q8TCT9 377 aa20.2■□□□□ 0.82
CPNE1-219ENST00000440240 MR1Q95460 341 aa20.2■□□□□ 0.82
CPNE1-219ENST00000440240 LRFN5Q96NI6 719 aa20.2■□□□□ 0.82
CPNE1-219ENST00000440240 ARNT2Q9HBZ2 717 aa20.2■□□□□ 0.82
CPNE1-219ENST00000440240 SYTL2Q9HCH5 934 aa20.2■□□□□ 0.82
CPNE1-219ENST00000440240 C1GALT1Q9NS00 363 aa20.2■□□□□ 0.82
CPNE1-219ENST00000440240 SOHLH2Q9NX45 425 aa20.2■□□□□ 0.82
CPNE1-219ENST00000440240 ANKMY1Q9P2S6 941 aa20.2■□□□□ 0.82
CPNE1-219ENST00000440240 MAP3K7O43318 606 aa20.19■□□□□ 0.82
CPNE1-219ENST00000440240 POLR2CP19387 275 aaPredicted RBP20.19■□□□□ 0.82
CPNE1-219ENST00000440240 PTPN7P35236 360 aa20.19■□□□□ 0.82
CPNE1-219ENST00000440240 KPNA2P52292 529 aaKnown RBP20.19■□□□□ 0.82
CPNE1-219ENST00000440240 MSLNQ13421 630 aaPredicted RBP20.19■□□□□ 0.82
CPNE1-219ENST00000440240 GPR19Q15760 415 aa20.19■□□□□ 0.82
CPNE1-219ENST00000440240 IZUMO3Q5VZ72 239 aa20.19■□□□□ 0.82
CPNE1-219ENST00000440240 ZNF449Q6P9G9 518 aa20.19■□□□□ 0.82
CPNE1-219ENST00000440240 ZNF517Q6ZMY9 492 aaPredicted RBP20.19■□□□□ 0.82
CPNE1-219ENST00000440240 OR13C4Q8NGS5 318 aa20.19■□□□□ 0.82
CPNE1-219ENST00000440240 LCN9Q8WX39 176 aa20.19■□□□□ 0.82
CPNE1-219ENST00000440240 MIB2Q96AX9 1013 aa20.19■□□□□ 0.82
CPNE1-219ENST00000440240 RMDN2Q96LZ7 410 aa20.19■□□□□ 0.82
CPNE1-219ENST00000440240 SPATA13Q96N96 652 aa20.19■□□□□ 0.82
CPNE1-219ENST00000440240 SRMSQ9H3Y6 488 aa20.19■□□□□ 0.82
CPNE1-219ENST00000440240 FANCEQ9HB96 536 aa20.19■□□□□ 0.82
CPNE1-219ENST00000440240 PLAAQ9Y263 795 aa20.19■□□□□ 0.82
CPNE1-219ENST00000440240 CCDC66A2RUB6 948 aa20.18■□□□□ 0.82
CPNE1-219ENST00000440240 IFRD1O00458 451 aaPredicted RBP20.18■□□□□ 0.82
CPNE1-219ENST00000440240 PJA2O43164 708 aa20.18■□□□□ 0.82
CPNE1-219ENST00000440240 TJP3O95049 919 aa20.18■□□□□ 0.82
CPNE1-219ENST00000440240 CDH3P22223 829 aa20.18■□□□□ 0.82
CPNE1-219ENST00000440240 ZNF140P52738 457 aaPredicted RBP20.18■□□□□ 0.82
CPNE1-219ENST00000440240 NAP1L1P55209 391 aaKnown RBP20.18■□□□□ 0.82
CPNE1-219ENST00000440240 RWDD2BP57060 319 aa20.18■□□□□ 0.82
CPNE1-219ENST00000440240 OLIG2Q13516 323 aa20.18■□□□□ 0.82
CPNE1-219ENST00000440240 LILRA3Q8N6C8 439 aaPredicted RBP20.18■□□□□ 0.82
CPNE1-219ENST00000440240 NAT14Q8WUY8 206 aa20.18■□□□□ 0.82
CPNE1-219ENST00000440240 CPT1BQ92523 772 aa20.18■□□□□ 0.82
CPNE1-219ENST00000440240 FERD3LQ96RJ6 166 aa20.18■□□□□ 0.82
CPNE1-219ENST00000440240 RUFY1Q96T51 708 aa20.18■□□□□ 0.82
CPNE1-219ENST00000440240 TBL1YQ9BQ87 522 aa20.18■□□□□ 0.82
CPNE1-219ENST00000440240 VPS37BQ9H9H4 285 aa20.18■□□□□ 0.82
CPNE1-219ENST00000440240 POMT2Q9UKY4 750 aa20.18■□□□□ 0.82
CPNE1-219ENST00000440240 EPN1Q9Y6I3 576 aaPredicted RBP20.18■□□□□ 0.82
CPNE1-219ENST00000440240 SLC9B1P1A6NJY1 282 aa20.17■□□□□ 0.82
CPNE1-219ENST00000440240 MEN1O00255 615 aa20.17■□□□□ 0.82
CPNE1-219ENST00000440240 IPO7O95373 1038 aaKnown RBP20.17■□□□□ 0.82
CPNE1-219ENST00000440240 ARCN1P48444 511 aaKnown RBP20.17■□□□□ 0.82
CPNE1-219ENST00000440240 CD151P48509 253 aa20.17■□□□□ 0.82
CPNE1-219ENST00000440240 CD97P48960 835 aa20.17■□□□□ 0.82
CPNE1-219ENST00000440240 RPS18P62269 152 aaKnown RBP20.17■□□□□ 0.82
CPNE1-219ENST00000440240 TMPRSS15P98073 1019 aa20.17■□□□□ 0.82
CPNE1-219ENST00000440240 GPS2Q13227 327 aa20.17■□□□□ 0.82
CPNE1-219ENST00000440240 DENND5AQ6IQ26 1287 aa20.17■□□□□ 0.82
CPNE1-219ENST00000440240 SLC38A9Q8NBW4 561 aa20.17■□□□□ 0.82
CPNE1-219ENST00000440240 CCDC110Q8TBZ0 833 aa20.17■□□□□ 0.82
CPNE1-219ENST00000440240 FAM96AQ9H5X1 160 aa20.17■□□□□ 0.82
CPNE1-219ENST00000440240 ZDHHC3Q9NYG2 299 aa20.17■□□□□ 0.82
CPNE1-219ENST00000440240 CLEC18AA5D8T8 446 aa20.16■□□□□ 0.82
CPNE1-219ENST00000440240 LDB2O43679 373 aa20.16■□□□□ 0.82
CPNE1-219ENST00000440240 DNAJB5O75953 348 aa20.16■□□□□ 0.82
CPNE1-219ENST00000440240 RAB40ALP0C0E4 278 aa20.16■□□□□ 0.82
CPNE1-219ENST00000440240 MSL3P1P0C860 447 aa20.16■□□□□ 0.82
CPNE1-219ENST00000440240 PRDX3P30048 256 aaKnown RBP20.16■□□□□ 0.82
CPNE1-219ENST00000440240 PREPP48147 710 aa20.16■□□□□ 0.82
CPNE1-219ENST00000440240 MLLT10P55197 1068 aa20.16■□□□□ 0.82
CPNE1-219ENST00000440240 RPA4Q13156 261 aa20.16■□□□□ 0.82
CPNE1-219ENST00000440240 LAMB3Q13751 1172 aa20.16■□□□□ 0.82
CPNE1-219ENST00000440240 PLEKHS1Q5SXH7 462 aa20.16■□□□□ 0.82
CPNE1-219ENST00000440240 FBXO38Q6PIJ6 1188 aa20.16■□□□□ 0.82
CPNE1-219ENST00000440240 CLEC18BQ6UXF7 455 aa20.16■□□□□ 0.82
CPNE1-219ENST00000440240 FAM26EQ8N5C1 309 aa20.16■□□□□ 0.82
CPNE1-219ENST00000440240 CLEC18CQ8NCF0 446 aa20.16■□□□□ 0.82
CPNE1-219ENST00000440240 CLIP3Q96DZ5 547 aa20.16■□□□□ 0.82
CPNE1-219ENST00000440240 PPM1MQ96MI6 270 aa20.16■□□□□ 0.82
CPNE1-219ENST00000440240 TLR10Q9BXR5 811 aa20.16■□□□□ 0.82
CPNE1-219ENST00000440240 TRIM55Q9BYV6 548 aa20.16■□□□□ 0.82
CPNE1-219ENST00000440240 ING2Q9H160 280 aa20.16■□□□□ 0.82
CPNE1-219ENST00000440240 CHST8Q9H2A9 424 aa20.16■□□□□ 0.82
CPNE1-219ENST00000440240 TFB2MQ9H5Q4 396 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms