RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 RNF165Q6ZSG1 346 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 FKBP9P1Q75LS8 142 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 PARS2Q7L3T8 475 aaKnown RBP4.69□□□□□ -1.66
EDEM3-203ENST00000439962 BBS5Q8N3I7 341 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 DCAF4L2Q8NA75 395 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 NRG4Q8WWG1 115 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 ROPN1LQ96C74 230 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 PRR11Q96HE9 360 aaPredicted RBP4.69□□□□□ -1.66
EDEM3-203ENST00000439962 LMLNQ96KR4 655 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 UBXN10Q96LJ8 280 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 HEPHQ9BQS7 1158 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 C1QTNF3Q9BXJ4 246 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 FSD1LQ9BXM9 530 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 ARMCX1Q9P291 453 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 RALYQ9UKM9 306 aaKnown RBP4.69□□□□□ -1.66
EDEM3-203ENST00000439962 FBXO5Q9UKT4 447 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 POMPQ9Y244 141 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 BTBD3Q9Y2F9 522 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 USP24Q9UPU5 2620 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 SMIM31A0A1B0GVY4 71 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 LRRC72A6NJI9 287 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 PFDN6O15212 129 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 GRID2O43424 1007 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 LZTS3O60299 673 aaPredicted RBP4.69□□□□□ -1.66
EDEM3-203ENST00000439962 RNGTTO60942 597 aaKnown RBP4.69□□□□□ -1.66
EDEM3-203ENST00000439962 PMPCBO75439 489 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 BCAS2O75934 225 aaPredicted RBP4.69□□□□□ -1.66
EDEM3-203ENST00000439962 LATS1O95835 1130 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 PEX11BO96011 259 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 MT-CYBP00156 380 aaPredicted RBP4.69□□□□□ -1.66
EDEM3-203ENST00000439962 NPPAP01160 153 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 AHSGP02765 367 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 PDHA1P08559 390 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 SBK3P0C264 359 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 UQCRBP14927 111 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 TFEBP19484 476 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 PIK3R1P27986 724 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 SNRPD1P62314 119 aaKnown RBP4.69□□□□□ -1.66
EDEM3-203ENST00000439962 DSC2Q02487 901 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 SF3A3Q12874 501 aaKnown RBP eCLIP4.69□□□□□ -1.66
EDEM3-203ENST00000439962 SGCGQ13326 291 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 SERINC3Q13530 473 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 CCNIQ14094 377 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 UBAP2LQ14157 1087 aaKnown RBP4.69□□□□□ -1.66
EDEM3-203ENST00000439962 GALNT3Q14435 633 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 CARD16Q5EG05 197 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 PIGGQ5H8A4 983 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 CERCAMQ5T4B2 595 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 ARMC12Q5T9G4 340 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 NEPROQ6NW34 567 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 METTL2BQ6P1Q9 378 aaKnown RBP4.69□□□□□ -1.66
EDEM3-203ENST00000439962 C16orf46Q6P387 395 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 RFLNAQ6ZTI6 216 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 RAPH1Q70E73 1250 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 TRIM74Q86UV6 250 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 ZSWIM9Q86XI8 627 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 ST13P4Q8IZP2 240 aaPredicted RBP4.69□□□□□ -1.66
EDEM3-203ENST00000439962 CENPLQ8N0S6 344 aaPredicted RBP4.69□□□□□ -1.66
EDEM3-203ENST00000439962 FSTL5Q8N475 847 aaPredicted RBP4.69□□□□□ -1.66
EDEM3-203ENST00000439962 MARVELD2Q8N4S9 558 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 ZNF781Q8N8C0 355 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 OR2AP1Q8NGE2 309 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 SPATA22Q8NHS9 363 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 RHBDD1Q8TEB9 315 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 TRPC4APQ8TEL6 797 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 FUBP1Q96AE4 644 aaKnown RBP4.69□□□□□ -1.66
EDEM3-203ENST00000439962 MFSD3Q96ES6 412 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 ZNF419Q96HQ0 510 aaPredicted RBP4.69□□□□□ -1.66
EDEM3-203ENST00000439962 MRGPRX2Q96LB1 330 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 RSPH9Q9H1X1 276 aaPredicted RBP4.69□□□□□ -1.66
EDEM3-203ENST00000439962 TM9SF3Q9HD45 589 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 TMEM9BQ9NQ34 198 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 CHRAC1Q9NRG0 131 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 PNPOQ9NVS9 261 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 RBM22Q9NW64 420 aaKnown RBP eCLIP4.69□□□□□ -1.66
EDEM3-203ENST00000439962 PILRBQ9UKJ0 227 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 SUFUQ9UMX1 484 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 PRKAB1Q9Y478 270 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 WASF2Q9Y6W5 498 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 COL4A2P08572 1712 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 CEP192Q8TEP8 1941 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 TRIM38O00635 465 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 CDX4O14627 284 aaPredicted RBP4.68□□□□□ -1.66
EDEM3-203ENST00000439962 RAD51BO15315 384 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 INPP4BO15327 924 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 USP12O75317 370 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 LYPLA1O75608 230 aaPredicted RBP4.68□□□□□ -1.66
EDEM3-203ENST00000439962 ZMPSTE24O75844 475 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 IPO13O94829 963 aaKnown RBP4.68□□□□□ -1.66
EDEM3-203ENST00000439962 ASLP04424 464 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 IGHV4-34P06331 123 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 C8BP07358 591 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 CHRM1P11229 460 aaPredicted RBP4.68□□□□□ -1.66
EDEM3-203ENST00000439962 ADRB3P13945 408 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 IMPDH1P20839 514 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 TAS2R38P59533 333 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 SFSWAPQ12872 951 aaKnown RBP4.68□□□□□ -1.66
EDEM3-203ENST00000439962 PTK2BQ14289 1009 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 ACOX1Q15067 660 aa4.68□□□□□ -1.66
EDEM3-203ENST00000439962 CYTH1Q15438 398 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms