RNA–Protein interactions for RNA: ENST00000439961.2

SUMO1P3-201, Transcript of SUMO1 pseudogene 3, humanhuman

BASIC

Gene SUMO1P3, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1P3-201ENST00000439961 RNFT2Q96EX2 444 aa0.45□□□□□ -2.34
SUMO1P3-201ENST00000439961 RBM17Q96I25 401 aaKnown RBP0.45□□□□□ -2.34
SUMO1P3-201ENST00000439961 GPATCH3Q96I76 525 aa0.45□□□□□ -2.34
SUMO1P3-201ENST00000439961 SLC41A2Q96JW4 573 aa0.45□□□□□ -2.34
SUMO1P3-201ENST00000439961 BBS4Q96RK4 519 aa0.45□□□□□ -2.34
SUMO1P3-201ENST00000439961 RMDN3Q96TC7 470 aa0.45□□□□□ -2.34
SUMO1P3-201ENST00000439961 TAF1DQ9H5J8 278 aaPredicted RBP0.45□□□□□ -2.34
SUMO1P3-201ENST00000439961 LTB4R2Q9NPC1 389 aa0.45□□□□□ -2.34
SUMO1P3-201ENST00000439961 GEMIN8Q9NWZ8 242 aaKnown RBP0.45□□□□□ -2.34
SUMO1P3-201ENST00000439961 PPP1R14DQ9NXH3 145 aa0.45□□□□□ -2.34
SUMO1P3-201ENST00000439961 HCN3Q9P1Z3 774 aa0.45□□□□□ -2.34
SUMO1P3-201ENST00000439961 KCND3Q9UK17 655 aa0.45□□□□□ -2.34
SUMO1P3-201ENST00000439961 DERAQ9Y315 318 aa0.45□□□□□ -2.34
SUMO1P3-201ENST00000439961 FAM96BQ9Y3D0 163 aa0.45□□□□□ -2.34
SUMO1P3-201ENST00000439961 PCDHGB2Q9Y5G2 931 aa0.45□□□□□ -2.34
SUMO1P3-201ENST00000439961 COL5A1P20908 1838 aaPredicted RBP0.45□□□□□ -2.34
SUMO1P3-201ENST00000439961 A0A1W2PN81 502 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 KANSL1LA0AUZ9 987 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 GAGE10A6NGK3 116 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 AQP12BA6NM10 295 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 LGALS16A8MUM7 142 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 USP17L23D6RBM5 183 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 FAM90A26D6RGX4 464 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 ACKR2O00590 384 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 PER2O15055 1255 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 SH3BGRLO75368 114 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 WISP2O76076 250 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 FTCDO95954 541 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 BCL10O95999 233 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 TFP02787 698 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 UGT1A1P22309 533 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 CA6P23280 308 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 ADD2P35612 726 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 CHRNA7P36544 502 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 TSFMP43897 325 aaKnown RBP0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 PAPOLAP51003 745 aaKnown RBP0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 MMP15P51511 669 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 PNLIPRP1P54315 467 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 RPS18P62269 152 aaKnown RBP0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 TFAP4Q01664 338 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 PRKCZQ05513 592 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 LRRC63Q05C16 580 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 NAE1Q13564 534 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 BLMHQ13867 455 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 EFR3AQ14156 821 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 NAA25Q14CX7 972 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 PPP2R5BQ15173 497 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 CDONQ4KMG0 1287 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 PDLIM3Q53GG5 364 aaPredicted RBP0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 FAM109BQ6ICB4 259 aaPredicted RBP0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 REG3GQ6UW15 175 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 PQLC2Q6ZP29 291 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 SYT13Q7L8C5 426 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 GSTA5Q7RTV2 222 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 ZSCAN2Q7Z7L9 614 aaPredicted RBP0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 PTOV1Q86YD1 416 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 PM20D2Q8IYS1 436 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 PAF1Q8N7H5 531 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 TDRD5Q8NAT2 981 aaKnown RBP0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 SCAMP5Q8TAC9 235 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 ZCCHC10Q8TBK6 192 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 STYXQ8WUJ0 223 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 RUBCNQ92622 972 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 MOAP1Q96BY2 351 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 C8orf48Q96LL4 319 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 ATF6BQ99941 703 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 TMEM47Q9BQJ4 181 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 NAA15Q9BXJ9 866 aaKnown RBP0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 TDRD1Q9BXT4 1180 aaKnown RBP0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 TMEM39BQ9GZU3 492 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 USP44Q9H0E7 712 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 TAOK3Q9H2K8 898 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 STN1Q9H668 368 aaKnown RBP0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 MAGIXQ9H6Y5 334 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 OBP2BQ9NPH6 170 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 NLRC4Q9NPP4 1024 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 SNTG1Q9NSN8 517 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 MPP6Q9NZW5 540 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 KIAA1456Q9P272 454 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 PEMTQ9UBM1 199 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 AAR2Q9Y312 384 aaKnown RBP0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 RRP7AQ9Y3A4 280 aaKnown RBP0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 YIPF1Q9Y548 306 aa0.44□□□□□ -2.34
SUMO1P3-201ENST00000439961 A0A087WV62 115 aa0.43□□□□□ -2.34
SUMO1P3-201ENST00000439961 MED19A0JLT2 244 aaPredicted RBP0.43□□□□□ -2.34
SUMO1P3-201ENST00000439961 PABPN1LA6NDY0 278 aaKnown RBP0.43□□□□□ -2.34
SUMO1P3-201ENST00000439961 FAM90A7PA6NKC0 464 aa0.43□□□□□ -2.34
SUMO1P3-201ENST00000439961 LRRC53A6NM62 1247 aa0.43□□□□□ -2.34
SUMO1P3-201ENST00000439961 EIF4E1BA6NMX2 242 aaKnown RBP0.43□□□□□ -2.34
SUMO1P3-201ENST00000439961 FAM90A22PA8MWA6 464 aa0.43□□□□□ -2.34
SUMO1P3-201ENST00000439961 FAM90A12PA8MX19 464 aa0.43□□□□□ -2.34
SUMO1P3-201ENST00000439961 FAM90A23PA8MXZ1 464 aa0.43□□□□□ -2.34
SUMO1P3-201ENST00000439961 PEX12O00623 359 aa0.43□□□□□ -2.34
SUMO1P3-201ENST00000439961 MAP2K7O14733 419 aa0.43□□□□□ -2.34
SUMO1P3-201ENST00000439961 SEC14L5O43304 696 aa0.43□□□□□ -2.34
SUMO1P3-201ENST00000439961 TMCC2O75069 709 aa0.43□□□□□ -2.34
SUMO1P3-201ENST00000439961 CAND2O75155 1236 aa0.43□□□□□ -2.34
SUMO1P3-201ENST00000439961 FAM155BO75949 473 aa0.43□□□□□ -2.34
SUMO1P3-201ENST00000439961 KRT38O76015 456 aa0.43□□□□□ -2.34
SUMO1P3-201ENST00000439961 CCNDBP1O95273 360 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms