RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 SGCDQ92629 289 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 APBB2Q92870 758 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 CD101Q93033 1021 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 NSUN4Q96CB9 384 aaKnown RBP3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 RSRC1Q96IZ7 334 aaKnown RBP3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 NEUROD6Q96NK8 337 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 OR2A14Q96R47 310 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 PCYT2Q99447 389 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 NUDT16L1Q9BRJ7 211 aaKnown RBP3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 MMP28Q9H239 520 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 CCDC68Q9H2F9 335 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 TCF7L2Q9NQB0 619 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 KLHL1Q9NR64 748 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 TMEM30AQ9NV96 361 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 MCM9Q9NXL9 1143 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 OGFRQ9NZT2 677 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 SWAP70Q9UH65 585 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 PIEZO1Q92508 2521 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 A0A0G2JPF8 293 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 B4DLN1 442 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 HNRNPCL3B7ZW38 293 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 K7ENM7 598 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 CTDSP2O14595 271 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 SCAMP1O15126 338 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 STARD3NLO95772 234 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 ICAM1P05362 532 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 TUBBP07437 444 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 HNRNPCL4P0DMR1 293 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 DDX5P17844 614 aaKnown RBP3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 PSMB10P40306 273 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 FUT6P51993 359 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 MRPL12P52815 198 aaKnown RBP3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 MFAP4P55083 255 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 TAS2R40P59535 323 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 CSNK2A1P68400 391 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 TFAP4Q01664 338 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 GRIK2Q13002 908 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 RBM39Q14498 530 aaKnown RBP3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 ADIPOQQ15848 244 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 SYT16Q17RD7 645 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 ZNF805Q5CZA5 627 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 RAB41Q5JT25 222 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 DCST1Q5T197 706 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 CFAP58Q5T655 872 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 JADE1Q6IE81 842 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 CFAP77Q6ZQR2 320 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 ENOSF1Q7L5Y1 443 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 CACNA2D4Q7Z3S7 1137 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 CCDC190Q86UF4 302 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 DCUN1D3Q8IWE4 304 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 RPAP2Q8IXW5 612 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 ZNF34Q8IZ26 560 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 BEST3Q8N1M1 668 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 PCDH20Q8N6Y1 951 aaKnown RBP3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 CSNK2A3Q8NEV1 391 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 DUSP19Q8WTR2 217 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 DCPSQ96C86 337 aaKnown RBP3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 RHBDF1Q96CC6 855 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 PGAM5Q96HS1 289 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 EGLN2Q96KS0 407 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 TTC14Q96N46 770 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 PGLYRP2Q96PD5 576 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 MTERF1Q99551 399 aaKnown RBP3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 SEPT5Q99719 369 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 SH3GL2Q99962 352 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 NSMCE4AQ9NXX6 385 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 THEGQ9P2T0 379 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 ERRFI1Q9UJM3 462 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 RPS6KA6Q9UK32 745 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 KLHL20Q9Y2M5 609 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 ZNF711Q9Y462 761 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 LOXL2Q9Y4K0 774 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 CEP290O15078 2479 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 AKAP11Q9UKA4 1901 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 DICER1Q9UPY3 1922 aaKnown RBP3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 RGPD5Q99666 1765 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 CARMIL3Q8ND23 1372 aa3.22□□□□□ -1.89
HMGB3P12-201ENST00000438745 PDS5AQ29RF7 1337 aaKnown RBP3.21□□□□□ -1.89
HMGB3P12-201ENST00000438745 TTC21BQ7Z4L5 1316 aa3.21□□□□□ -1.89
HMGB3P12-201ENST00000438745 SPTBN5Q9NRC6 3674 aaKnown RBP3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 RBBP6Q7Z6E9 1792 aaKnown RBP3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 A0A1W2PS18 150 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 GOLGA6L9A6NEM1 432 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 OGG1O15527 345 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 SPINT2O43291 252 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 PLPP2O43688 288 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 XPNPEP2O43895 674 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 LMX1BO60663 402 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 BEST1O76090 585 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 GAS8-AS1O95177 125 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 HIST1H2ABP04908 130 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 HLA-DOBP13765 273 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 HIST1H2ADP20671 130 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 UBA1P22314 1058 aaKnown RBP3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 PON1P27169 355 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 HOXC9P31274 260 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 MSH2P43246 934 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 GLIPR1P48060 266 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 NRIP1P48552 1158 aa3.21□□□□□ -1.9
HMGB3P12-201ENST00000438745 HNRNPH2P55795 449 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms