RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 C17orf80Q9BSJ5 609 aa18.27■□□□□ 0.52
CLK1-205ENST00000434813 HTATIP2Q9BUP3 242 aa18.27■□□□□ 0.52
CLK1-205ENST00000434813 SMOXQ9NWM0 555 aa18.27■□□□□ 0.52
CLK1-205ENST00000434813 CRLS1Q9UJA2 301 aa18.27■□□□□ 0.52
CLK1-205ENST00000434813 OAZ3Q9UMX2 235 aa18.27■□□□□ 0.52
CLK1-205ENST00000434813 PDLIM1O00151 329 aa18.27■□□□□ 0.51
CLK1-205ENST00000434813 KIAA0355O15063 1070 aa18.27■□□□□ 0.51
CLK1-205ENST00000434813 ACOX3O15254 700 aa18.27■□□□□ 0.51
CLK1-205ENST00000434813 KATNA1O75449 491 aa18.27■□□□□ 0.51
CLK1-205ENST00000434813 CLDN7O95471 211 aa18.27■□□□□ 0.51
CLK1-205ENST00000434813 GUCA1CO95843 209 aa18.27■□□□□ 0.51
CLK1-205ENST00000434813 IGSF6O95976 241 aa18.27■□□□□ 0.51
CLK1-205ENST00000434813 HRH2P25021 359 aa18.27■□□□□ 0.51
CLK1-205ENST00000434813 CALRP27797 417 aaKnown RBP18.27■□□□□ 0.51
CLK1-205ENST00000434813 SPAM1P38567 509 aa18.27■□□□□ 0.51
CLK1-205ENST00000434813 MAP7Q14244 749 aa18.27■□□□□ 0.51
CLK1-205ENST00000434813 MPP7Q5T2T1 576 aa18.27■□□□□ 0.51
CLK1-205ENST00000434813 TPGS1Q6ZTW0 290 aa18.27■□□□□ 0.51
CLK1-205ENST00000434813 ALDH16A1Q8IZ83 802 aa18.27■□□□□ 0.51
CLK1-205ENST00000434813 CBARPQ8N350 705 aaPredicted RBP18.27■□□□□ 0.51
CLK1-205ENST00000434813 FAM47BQ8NA70 645 aa18.27■□□□□ 0.51
CLK1-205ENST00000434813 YME1L1Q96TA2 773 aa18.27■□□□□ 0.51
CLK1-205ENST00000434813 ADI1Q9BV57 179 aa18.27■□□□□ 0.51
CLK1-205ENST00000434813 RPF2Q9H7B2 306 aaKnown RBP18.27■□□□□ 0.51
CLK1-205ENST00000434813 SPG21Q9NZD8 308 aa18.27■□□□□ 0.51
CLK1-205ENST00000434813 MAGEL2Q9UJ55 1249 aa18.27■□□□□ 0.51
CLK1-205ENST00000434813 MAFFQ9ULX9 164 aa18.27■□□□□ 0.51
CLK1-205ENST00000434813 TRIM16O95361 564 aa18.26■□□□□ 0.51
CLK1-205ENST00000434813 ACRP10323 421 aa18.26■□□□□ 0.51
CLK1-205ENST00000434813 MYF6P23409 242 aa18.26■□□□□ 0.51
CLK1-205ENST00000434813 TUBA4AP68366 448 aa18.26■□□□□ 0.51
CLK1-205ENST00000434813 LMAN2Q12907 356 aa18.26■□□□□ 0.51
CLK1-205ENST00000434813 CRY1Q16526 586 aa18.26■□□□□ 0.51
CLK1-205ENST00000434813 PHKG1Q16816 387 aa18.26■□□□□ 0.51
CLK1-205ENST00000434813 SMU1Q2TAY7 513 aa18.26■□□□□ 0.51
CLK1-205ENST00000434813 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.26■□□□□ 0.51
CLK1-205ENST00000434813 KCTD21Q4G0X4 260 aa18.26■□□□□ 0.51
CLK1-205ENST00000434813 GRAMD4Q6IC98 578 aa18.26■□□□□ 0.51
CLK1-205ENST00000434813 SULT1C3Q6IMI6 304 aa18.26■□□□□ 0.51
CLK1-205ENST00000434813 B3GNT6Q6ZMB0 384 aa18.26■□□□□ 0.51
CLK1-205ENST00000434813 LYSMD1Q96S90 227 aa18.26■□□□□ 0.51
CLK1-205ENST00000434813 EGFL8Q99944 293 aa18.26■□□□□ 0.51
CLK1-205ENST00000434813 CD244Q9BZW8 370 aa18.26■□□□□ 0.51
CLK1-205ENST00000434813 CAAP1Q9H8G2 361 aa18.26■□□□□ 0.51
CLK1-205ENST00000434813 RC3H2Q9HBD1 1191 aaKnown RBP18.26■□□□□ 0.51
CLK1-205ENST00000434813 RDH14Q9HBH5 336 aa18.26■□□□□ 0.51
CLK1-205ENST00000434813 MRPL17Q9NRX2 175 aaKnown RBP18.26■□□□□ 0.51
CLK1-205ENST00000434813 WWOXQ9NZC7 414 aa18.26■□□□□ 0.51
CLK1-205ENST00000434813 OPTCQ9UBM4 332 aa18.26■□□□□ 0.51
CLK1-205ENST00000434813 PCDHB3Q9Y5E6 796 aa18.26■□□□□ 0.51
CLK1-205ENST00000434813 ZNF821O75541 412 aaPredicted RBP18.25■□□□□ 0.51
CLK1-205ENST00000434813 VARSP26640 1264 aaKnown RBP18.25■□□□□ 0.51
CLK1-205ENST00000434813 SERPINA4P29622 427 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 GKP32189 559 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 ALDH3B2P48448 385 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 CHRNA6Q15825 494 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 RFTN2Q52LD8 501 aaPredicted RBP18.25■□□□□ 0.51
CLK1-205ENST00000434813 HABP4Q5JVS0 413 aaKnown RBP18.25■□□□□ 0.51
CLK1-205ENST00000434813 GALNT13Q8IUC8 556 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 NXPE1Q8N323 547 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 PAF1Q8N7H5 531 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 OSCP1Q8WVF1 389 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 RHBDF1Q96CC6 855 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 CGREF1Q99674 301 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 APOL5Q9BWW9 433 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 CLK4Q9HAZ1 481 aaKnown RBP18.25■□□□□ 0.51
CLK1-205ENST00000434813 ABCB8Q9NUT2 735 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 THEGQ9P2T0 379 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 SLC8A2Q9UPR5 921 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 USP22Q9UPT9 525 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 NEUROG3Q9Y4Z2 214 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 ZFC3H1O60293 1989 aaKnown RBP18.25■□□□□ 0.51
CLK1-205ENST00000434813 RNF103-CHMP3A0A140T963 221 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 AGAP14A8MT82 685 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 WDR47O94967 919 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 NELFEP18615 380 aaKnown RBP18.25■□□□□ 0.51
CLK1-205ENST00000434813 UGT1A1P22309 533 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 UGT1A4P22310 534 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 UGT1A3P35503 534 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 UGT1A5P35504 534 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 PTPN5P54829 565 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 OR4D2P58180 307 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 MERTKQ12866 999 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 MAD2L1Q13257 205 aaPredicted RBP18.25■□□□□ 0.51
CLK1-205ENST00000434813 PWP1Q13610 501 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 KIAA0040Q15053 153 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 RBBP5Q15291 538 aaKnown RBP18.25■□□□□ 0.51
CLK1-205ENST00000434813 SLC36A3Q495N2 470 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 MPPE1Q53F39 396 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 HTR3DQ70Z44 454 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 ZSWIM9Q86XI8 627 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 AUTS2Q8WXX7 1259 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 TNKS2Q9H2K2 1166 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 KIAA1522Q9P206 1035 aaPredicted RBP18.25■□□□□ 0.51
CLK1-205ENST00000434813 TRPS1Q9UHF7 1281 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 ZNF510Q9Y2H8 683 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 ANGPTL3Q9Y5C1 460 aa18.25■□□□□ 0.51
CLK1-205ENST00000434813 CCDC160A6NGH7 325 aa18.24■□□□□ 0.51
CLK1-205ENST00000434813 RGS14O43566 566 aa18.24■□□□□ 0.51
CLK1-205ENST00000434813 RPL38P63173 70 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms