RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 SLC7A9P82251 487 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 COX10Q12887 443 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 NME3Q13232 169 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 KANK2Q63ZY3 851 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 KCTD11Q693B1 232 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 CASP12Q6UXS9 341 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 TAS2R42Q7RTR8 314 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 PIWIL3Q7Z3Z3 882 aaKnown RBP3.71□□□□□ -1.82
SHPRH-205ENST00000433355 CACTIN-AS1Q8N1I8 211 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 SYNPOQ8N3V7 929 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 KBTBD7Q8WVZ9 684 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 UHRF1Q96T88 793 aaPredicted RBP3.71□□□□□ -1.82
SHPRH-205ENST00000433355 EPB41L4BQ9H329 900 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 LYARQ9NX58 379 aaKnown RBP3.71□□□□□ -1.82
SHPRH-205ENST00000433355 LOC285095A0A1B0GVY8 99 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 LRRC72A6NJI9 287 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 GPR25O00155 361 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 AIREO43918 545 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 SYNCRIPO60506 623 aaKnown RBP3.71□□□□□ -1.82
SHPRH-205ENST00000433355 FMO6PO60774 539 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 ACADMP11310 421 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 FKBP2P26885 142 aaKnown RBP3.71□□□□□ -1.82
SHPRH-205ENST00000433355 PSMB4P28070 264 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 ZNF157P51786 506 aaPredicted RBP3.71□□□□□ -1.82
SHPRH-205ENST00000433355 PFKPQ01813 784 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 SSBP1Q04837 148 aaKnown RBP3.71□□□□□ -1.82
SHPRH-205ENST00000433355 RGS21Q2M5E4 152 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 GPAT3Q53EU6 434 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 TAS1R3Q7RTX0 852 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 RANBP3LQ86VV4 465 aaPredicted RBP3.71□□□□□ -1.82
SHPRH-205ENST00000433355 ERI1Q8IV48 349 aaKnown RBP3.71□□□□□ -1.82
SHPRH-205ENST00000433355 OR7A2PQ8NGA2 310 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 GAD1Q99259 594 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 LGMNQ99538 433 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 AIF1LQ9BQI0 150 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 DPY30Q9C005 99 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 ADAM7Q9H2U9 754 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 MID1IP1Q9NPA3 183 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 MIEF1Q9NQG6 463 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.71□□□□□ -1.82
SHPRH-205ENST00000433355 STMN3Q9NZ72 180 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 GNEQ9Y223 722 aaKnown RBP3.71□□□□□ -1.82
SHPRH-205ENST00000433355 POFUT2Q9Y2G5 429 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 PCDHGB7Q9Y5F8 929 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 CACNA1DQ01668 2161 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 ABCA4P78363 2273 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 USF3Q68DE3 2245 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 SOWAHBA6NEL2 793 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 LOC110117498-PIK3R3F6TDL0 507 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 GFRA2O00451 464 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 WNT9AO14904 365 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 KHKP50053 298 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 STXBP1P61764 594 aaKnown RBP3.71□□□□□ -1.82
SHPRH-205ENST00000433355 PWP1Q13610 501 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 MYLK3Q32MK0 819 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 GDPD4Q6W3E5 623 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 GRPEL2Q8TAA5 225 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 SFXN5Q8TD22 340 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 PIK3R3Q92569 461 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 NXPE3Q969Y0 559 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 GATA5Q9BWX5 397 aaPredicted RBP3.71□□□□□ -1.82
SHPRH-205ENST00000433355 RUBCNLQ9H714 662 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 GORASP2Q9H8Y8 452 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 POMPQ9Y244 141 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 FAM221BA6H8Z2 402 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 ARL5CA6NH57 179 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 PAICSP22234 425 aaKnown RBP3.71□□□□□ -1.82
SHPRH-205ENST00000433355 RGS7P49802 495 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 CRADDP78560 199 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 C2orf80Q0P641 193 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 EFEMP1Q12805 493 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 GPR50Q13585 617 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 C17orf64Q86WR6 236 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 PEX5LQ8IYB4 626 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 ZNF440Q8IYI8 595 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 OR52L1Q8NGH7 329 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 SEMA3CQ99985 751 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 HDHD5Q9BXW7 423 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 ZNF219Q9P2Y4 722 aaPredicted RBP3.71□□□□□ -1.82
SHPRH-205ENST00000433355 ENTPD2Q9Y5L3 495 aa3.71□□□□□ -1.82
SHPRH-205ENST00000433355 MYLKQ15746 1914 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 C17orf113A0A1B0GUU1 675 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 H3BNH8 94 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 F8A1P23610 371 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 EEF1B2P24534 225 aaKnown RBP3.7□□□□□ -1.82
SHPRH-205ENST00000433355 EPHA5P54756 1037 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 ADAM17P78536 824 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 OGDHQ02218 1023 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 ZNF45Q02386 682 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 RELAQ04206 551 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 FOLH1Q04609 750 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 TAF5Q15542 800 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 NCBP2-AS2Q69YL0 99 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 FAM228AQ86W67 206 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 SLC2A12Q8TD20 617 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 PHF10Q8WUB8 498 aaKnown RBP3.7□□□□□ -1.82
SHPRH-205ENST00000433355 PCED1BQ96HM7 432 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 CMTM3Q96MX0 182 aa3.7□□□□□ -1.82
SHPRH-205ENST00000433355 C7orf50Q9BRJ6 194 aaKnown RBP3.7□□□□□ -1.82
SHPRH-205ENST00000433355 ARL15Q9NXU5 204 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms