RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 PSME4Q14997 1843 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 KDM4FA0A1W2PPD8 638 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 CENPBD1B2RD01 187 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 ECI2O75521 394 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 EPHA2P29317 976 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 LIPAP38571 399 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 PIK3CGP48736 1102 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 SLC35A2P78381 396 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 SYT6Q5T7P8 510 aaPredicted RBP11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 AGAP6Q5VW22 663 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 TAC4Q86UU9 113 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 CYP4Z1Q86W10 505 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 ZFAND4Q86XD8 727 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 STAG3L4Q8TBR4 150 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 METTL6Q8TCB7 284 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 AGAP4Q96P64 663 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 RNF39Q9H2S5 420 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 MMP27Q9H306 513 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 IKZF5Q9H5V7 419 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 MRM3Q9HC36 420 aaKnown RBP11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 OSGIN1Q9UJX0 560 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 UBQLN1Q9UMX0 589 aaKnown RBP11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 PKP3Q9Y446 797 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 ANGPTL3Q9Y5C1 460 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 ELOVL7A1L3X0 281 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 NPEPPSL1A6NEC2 478 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 GADD45AP24522 165 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 ARPP19P56211 112 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 DSC2Q02487 901 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 GTDC1Q4AE62 458 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 NXNL2Q5VZ03 156 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 SETD9Q8NE22 299 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 OR52B6Q8NGF0 335 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 TSPEARQ8WU66 669 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 CEP19Q96LK0 163 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 ZNF599Q96NL3 588 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 KCNS3Q9BQ31 491 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 FAM124BQ9H5Z6 455 aaPredicted RBP11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 ZMYM5Q9UJ78 669 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 IKZF3Q9UKT9 509 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 ARL5AQ9Y689 179 aa11.37□□□□□ -0.59
HMGCS1-202ENST00000433297 A0A096LPI6 279 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 SMIM28A0A1B0GU29 152 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 ZSCAN5BA6NJL1 495 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 PTTG1O95997 202 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 C21orf33P30042 268 aaPredicted RBP11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 SOX4Q06945 474 aaPredicted RBP11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 SCAPQ12770 1279 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 PTGR1Q14914 329 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 SGO1Q5FBB7 561 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 SMYD5Q6GMV2 418 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 TTC23LQ6PF05 361 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 LINC00299Q6ZSB3 139 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 ARHGAP12Q8IWW6 846 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 CADM2Q8N3J6 435 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 AMER2Q8N7J2 671 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 AGBL3Q8NEM8 1001 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 PJA1Q8NG27 643 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 OR13C4Q8NGS5 318 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 Q96MT0 163 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 ATOH8Q96SQ7 321 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 CHCHD6Q9BRQ6 235 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 PRRG3Q9BZD7 231 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 CD274Q9NZQ7 290 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 KIF17Q9P2E2 1029 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 EIF2B4Q9UI10 523 aaKnown RBP11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 TMEFF2Q9UIK5 374 aaPredicted RBP11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 ZNF225Q9UK10 706 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 SCN4AP35499 1836 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 MYBPHLA2RUH7 354 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 PABPN1LA6NDY0 278 aaKnown RBP11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 C19orf81C9J6K1 198 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 CD3EAPO15446 510 aaKnown RBP11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 RGS5O15539 181 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 F9P00740 461 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 UROSP10746 265 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 SLC2A4P14672 509 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 RYKP34925 604 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 HTR6P50406 440 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 ARHGDIAP52565 204 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 NFKB2Q00653 900 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 TP53BP2Q13625 1128 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 PON2Q15165 354 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 BCL7AQ4VC05 210 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 SPANXN2Q5MJ10 180 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 DCAF15Q66K64 600 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 CYP20A1Q6UW02 462 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 BEND7Q8N7W2 519 aaPredicted RBP11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 ATG16L2Q8NAA4 619 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 IL17RDQ8NFM7 739 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 CLHC1Q8NHS4 586 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 TP53INP1Q96A56 240 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 OSMRQ99650 979 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 NFKBIZQ9BYH8 718 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 ROGDIQ9GZN7 287 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 ZFP14Q9HCL3 533 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 BTBD3Q9Y2F9 522 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 KRT87PA6NCN2 255 aa11.36□□□□□ -0.59
HMGCS1-202ENST00000433297 TBKBP1A7MCY6 615 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms