RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 NANOS1Q8WY41 292 aaKnown RBP9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 RNF31Q96EP0 1072 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 ABHD17AQ96GS6 310 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 ELMO2Q96JJ3 720 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 LINC00615Q96LM1 132 aaPredicted RBP9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 FCRL4Q96PJ5 515 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 CD180Q99467 661 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 C19orf43Q9BQ61 176 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 FICDQ9BVA6 458 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 EPN3Q9H201 632 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 C10orf88Q9H8K7 445 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 IMP3Q9NV31 184 aaKnown RBP9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 LNPEPQ9UIQ6 1025 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 ANAPC2Q9UJX6 822 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 KCND3Q9UK17 655 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 PCDHA3Q9Y5H8 950 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 USP9XQ93008 2570 aaPredicted RBP9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 OR5K3A6NET4 321 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 C2orf81A6NN90 581 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 C21orf140B9A014 251 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 H7C0C1 242 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 ARHGAP6O43182 974 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 UTP20O75691 2785 aaKnown RBP9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 RECKO95980 971 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 MT-ND3P03897 115 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 EBLN1P0CF75 366 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 MSH3P20585 1137 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 PSMB4P28070 264 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 PBLDP30039 288 aaPredicted RBP9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 ATP5OP48047 213 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 ZNF140P52738 457 aaPredicted RBP9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 OLIG2Q13516 323 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 SEPT6Q14141 434 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 PLCL1Q15111 1095 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 SPA17Q15506 151 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 SKIDA1Q1XH10 827 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 DNTTIP2Q5QJE6 756 aaKnown RBP9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 ANKRD20A2Q5SQ80 823 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 ANKRD20A1Q5TYW2 823 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 ANKRD20A3Q5VUR7 823 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 DENND5AQ6IQ26 1287 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 PWWP2BQ6NUJ5 590 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 DUS1LQ6P1R4 473 aaKnown RBP9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 C16orf46Q6P387 395 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 DET1Q7L5Y6 550 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 CDKL3Q8IVW4 592 aaPredicted RBP9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 CARFQ8N187 725 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 VWA5B2Q8N398 1253 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 D2HGDHQ8N465 521 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 SIDT2Q8NBJ9 832 aaKnown RBP9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 OR4K2Q8NGD2 314 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 CT55Q8WUE5 264 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 NAT14Q8WUY8 206 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 CALR3Q96L12 384 aaKnown RBP9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 RMDN2Q96LZ7 410 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 SPATA13Q96N96 652 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 MAP3K3Q99759 626 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 APOL2Q9BQE5 337 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 OSBPL8Q9BZF1 889 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 TRIM5Q9C035 493 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 WWP1Q9H0M0 922 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 KIR3DX1Q9H7L2 352 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 PDE7BQ9NP56 450 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 LUC7LQ9NQ29 371 aaKnown RBP9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 LHX9Q9NQ69 397 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 ZNF71Q9NQZ8 489 aaPredicted RBP9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 SLC24A2Q9UI40 661 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 RARRES3Q9UL19 164 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 ACSL5Q9ULC5 683 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 PADI1Q9ULC6 663 aa9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 AAR2Q9Y312 384 aaKnown RBP9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 CFAP20Q9Y6A4 193 aaKnown RBP9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 USP9YO00507 2555 aaPredicted RBP9.18□□□□□ -0.94
CDC42-IT1-201ENST00000431803 IGLV3-16A0A075B6K0 115 aa9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 MACROD2A1Z1Q3 448 aa9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 BTNL10A8MVZ5 291 aa9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 KCNN4O15554 427 aa9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 CREG1O75629 220 aa9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 SLC35G4P0C7Q5 338 aa9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 RBP3P10745 1247 aa9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 PYGMP11217 842 aa9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 CTNNA2P26232 953 aa9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 CYLC1P35663 651 aaPredicted RBP9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 SOX11P35716 441 aa9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 PRLHRP49683 370 aa9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 PMS2P54278 862 aa9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 EIF3EP60228 445 aaKnown RBP9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 TUBB4BP68371 445 aa9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 HSD11B2P80365 405 aa9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 PDE1BQ01064 536 aa9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 ACY1Q03154 408 aa9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 POU4F2Q12837 409 aa9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 DNASE1L3Q13609 305 aa9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 LAMB3Q13751 1172 aa9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 TUBB2AQ13885 445 aa9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 ERV3-1Q14264 604 aa9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 ZNF658BQ4V348 819 aaPredicted RBP9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 LACTB2Q53H82 288 aaPredicted RBP9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 CCDC181Q5TID7 509 aa9.17□□□□□ -0.94
CDC42-IT1-201ENST00000431803 CAPRIN2Q6IMN6 1127 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms