RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 HIBCHQ6NVY1 386 aaPredicted RBP16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 FOXR1Q6PIV2 292 aa16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 LMNTD2Q8IXW0 634 aa16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 AGBL5Q8NDL9 886 aa16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 CALML6Q8TD86 181 aa16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 FGF11Q92914 225 aa16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 FCRL3Q96P31 734 aaPredicted RBP16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 PANX3Q96QZ0 392 aa16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 KIR3DX1Q9H7L2 352 aa16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 LHX6Q9UPM6 363 aa16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 LOXL2Q9Y4K0 774 aa16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 CFAP20Q9Y6A4 193 aaKnown RBP16.97■□□□□ 0.31
CTDSP1-203ENST00000431127 GOLGA8KD6RF30 607 aa16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 H3BMM5 538 aa16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 GOLGA8TH3BQL2 631 aa16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 KIF2AO00139 706 aaPredicted RBP16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 KPNA5O15131 536 aa16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 TNFSF15O95150 251 aa16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 TYRP1P17643 537 aa16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 PDHA2P29803 388 aa16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 CSTF2P33240 577 aaKnown RBP eCLIP16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 ITGA8P53708 1063 aa16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 ADARP55265 1226 aaKnown RBP16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 BOP1Q14137 746 aaKnown RBP16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 PLCL1Q15111 1095 aa16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 ZNF572Q7Z3I7 529 aaPredicted RBP16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 PDZD3Q86UT5 571 aa16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 CILP2Q8IUL8 1156 aa16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 AGGF1Q8N302 714 aaeCLIP16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 GABPB2Q8TAK5 448 aaPredicted RBP16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 ASZ1Q8WWH4 475 aa16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 LRRC39Q96DD0 335 aa16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 ZDHHC12Q96GR4 267 aa16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 PRR11Q96HE9 360 aaPredicted RBP16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 EBNA1BP2Q99848 306 aaKnown RBP16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 TRIM31Q9BZY9 425 aa16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 RAB33BQ9H082 229 aa16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 P2RY12Q9H244 342 aa16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 MVB12BQ9H7P6 319 aa16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 ASCL3Q9NQ33 180 aa16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 INTS10Q9NVR2 710 aaKnown RBP16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 OGFRQ9NZT2 677 aa16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 TMEM9Q9P0T7 183 aa16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 SLC24A2Q9UI40 661 aa16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 CDC23Q9UJX2 597 aa16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 FAM169AQ9Y6X4 670 aa16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 DSPP15924 2871 aaKnown RBP16.96■□□□□ 0.31
CTDSP1-203ENST00000431127 MN1Q10571 1320 aaPredicted RBP16.96■□□□□ 0.3
CTDSP1-203ENST00000431127 UBA6A0AVT1 1052 aaPredicted RBP16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 SLC5A10A0PJK1 596 aa16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 TOX3O15405 576 aaPredicted RBP16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 URI1O94763 535 aaPredicted RBP16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 C9P02748 559 aa16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 ESR1P03372 595 aa16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 APOA4P06727 396 aa16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 MPSTP25325 297 aa16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 CAPZBP47756 277 aa16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 PREPP48147 710 aa16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 ARL4CP56559 192 aa16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 DHX9Q08211 1270 aaKnown RBP16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 C2orf54Q08AI8 447 aa16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 C16orf72Q14CZ0 275 aa16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 TMED2Q15363 201 aa16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 HIF1AQ16665 826 aa16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 BBS9Q3SYG4 887 aa16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 RCBTB1Q8NDN9 531 aa16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 ACVR1CQ8NER5 493 aa16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 LPGAT1Q92604 370 aa16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 TFGQ92734 400 aaPredicted RBP16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 FERD3LQ96RJ6 166 aa16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 TRIM56Q9BRZ2 755 aaKnown RBP16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 ERP44Q9BS26 406 aa16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 FAM167BQ9BTA0 163 aa16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 C20orf96Q9NUD7 363 aaPredicted RBP16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 EPHA6Q9UF33 1036 aa16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 ACACAQ13085 2346 aa16.95■□□□□ 0.3
CTDSP1-203ENST00000431127 ZFYVE26Q68DK2 2539 aa16.94■□□□□ 0.3
CTDSP1-203ENST00000431127 CDRT15L2A8MXV6 281 aa16.94■□□□□ 0.3
CTDSP1-203ENST00000431127 CAPN5O15484 640 aaPredicted RBP16.94■□□□□ 0.3
CTDSP1-203ENST00000431127 AOAHP28039 575 aa16.94■□□□□ 0.3
CTDSP1-203ENST00000431127 CCR7P32248 378 aa16.94■□□□□ 0.3
CTDSP1-203ENST00000431127 EIF3BP55884 814 aaKnown RBP16.94■□□□□ 0.3
CTDSP1-203ENST00000431127 CALCOCO2Q13137 446 aa16.94■□□□□ 0.3
CTDSP1-203ENST00000431127 TUBB2AQ13885 445 aa16.94■□□□□ 0.3
CTDSP1-203ENST00000431127 BRD3Q15059 726 aa16.94■□□□□ 0.3
CTDSP1-203ENST00000431127 SPANXN3Q5MJ09 141 aa16.94■□□□□ 0.3
CTDSP1-203ENST00000431127 SNAP47Q5SQN1 464 aa16.94■□□□□ 0.3
CTDSP1-203ENST00000431127 ZNF470Q6ECI4 717 aa16.94■□□□□ 0.3
CTDSP1-203ENST00000431127 DUS1LQ6P1R4 473 aaKnown RBP16.94■□□□□ 0.3
CTDSP1-203ENST00000431127 ARHGAP22Q7Z5H3 698 aa16.94■□□□□ 0.3
CTDSP1-203ENST00000431127 SNIP1Q8TAD8 396 aaKnown RBP16.94■□□□□ 0.3
CTDSP1-203ENST00000431127 GSDMBQ8TAX9 411 aa16.94■□□□□ 0.3
CTDSP1-203ENST00000431127 ZNF592Q92610 1267 aa16.94■□□□□ 0.3
CTDSP1-203ENST00000431127 RSC1A1Q92681 617 aa16.94■□□□□ 0.3
CTDSP1-203ENST00000431127 C9orf72Q96LT7 481 aa16.94■□□□□ 0.3
CTDSP1-203ENST00000431127 TUBB2BQ9BVA1 445 aa16.94■□□□□ 0.3
CTDSP1-203ENST00000431127 B3GNT4Q9C0J1 378 aa16.94■□□□□ 0.3
CTDSP1-203ENST00000431127 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.94■□□□□ 0.3
CTDSP1-203ENST00000431127 WHRNQ9P202 907 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms