RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 SIDT2Q8NBJ9 832 aaKnown RBP17.15■□□□□ 0.34
NUP50-208ENST00000430547 OR6P1Q8NGX9 317 aa17.15■□□□□ 0.34
NUP50-208ENST00000430547 KLHL6Q8WZ60 621 aa17.15■□□□□ 0.34
NUP50-208ENST00000430547 FERD3LQ96RJ6 166 aa17.15■□□□□ 0.34
NUP50-208ENST00000430547 EFHD1Q9BUP0 239 aa17.15■□□□□ 0.34
NUP50-208ENST00000430547 GPN2Q9H9Y4 310 aaPredicted RBP17.15■□□□□ 0.34
NUP50-208ENST00000430547 PDE7BQ9NP56 450 aa17.15■□□□□ 0.34
NUP50-208ENST00000430547 CASS4Q9NQ75 786 aa17.15■□□□□ 0.34
NUP50-208ENST00000430547 OR6C74A6NCV1 312 aa17.14■□□□□ 0.33
NUP50-208ENST00000430547 OR56A5P0C7T3 313 aa17.14■□□□□ 0.33
NUP50-208ENST00000430547 ZSCAN5DPP0CG00 497 aa17.14■□□□□ 0.33
NUP50-208ENST00000430547 NELFEP18615 380 aaKnown RBP17.14■□□□□ 0.33
NUP50-208ENST00000430547 FOXN2P32314 431 aa17.14■□□□□ 0.33
NUP50-208ENST00000430547 RPL22P35268 128 aaKnown RBP17.14■□□□□ 0.33
NUP50-208ENST00000430547 PPARGP37231 505 aaPredicted RBP17.14■□□□□ 0.33
NUP50-208ENST00000430547 GRIA1P42261 906 aa17.14■□□□□ 0.33
NUP50-208ENST00000430547 RPA4Q13156 261 aa17.14■□□□□ 0.33
NUP50-208ENST00000430547 SYTL3Q4VX76 610 aa17.14■□□□□ 0.33
NUP50-208ENST00000430547 PACS1Q6VY07 963 aa17.14■□□□□ 0.33
NUP50-208ENST00000430547 MICALCLQ6ZW33 695 aa17.14■□□□□ 0.33
NUP50-208ENST00000430547 PPP1R3BQ86XI6 285 aa17.14■□□□□ 0.33
NUP50-208ENST00000430547 KMT5CQ86Y97 462 aa17.14■□□□□ 0.33
NUP50-208ENST00000430547 ESX1Q8N693 406 aa17.14■□□□□ 0.33
NUP50-208ENST00000430547 ACVR1CQ8NER5 493 aa17.14■□□□□ 0.33
NUP50-208ENST00000430547 OR13J1Q8NGT2 312 aa17.14■□□□□ 0.33
NUP50-208ENST00000430547 LCN9Q8WX39 176 aa17.14■□□□□ 0.33
NUP50-208ENST00000430547 HDAC10Q969S8 669 aa17.14■□□□□ 0.33
NUP50-208ENST00000430547 ELMO2Q96JJ3 720 aa17.14■□□□□ 0.33
NUP50-208ENST00000430547 MAP3K3Q99759 626 aa17.14■□□□□ 0.33
NUP50-208ENST00000430547 EIF2B3Q9NR50 452 aaKnown RBP17.14■□□□□ 0.33
NUP50-208ENST00000430547 ANAPC5Q9UJX4 755 aa17.14■□□□□ 0.33
NUP50-208ENST00000430547 RIMKLBQ9ULI2 386 aa17.14■□□□□ 0.33
NUP50-208ENST00000430547 TCAF1Q9Y4C2 921 aa17.14■□□□□ 0.33
NUP50-208ENST00000430547 IGHV5-51A0A0C4DH38 117 aa17.13■□□□□ 0.33
NUP50-208ENST00000430547 ZNF891A8MT65 544 aaPredicted RBP17.13■□□□□ 0.33
NUP50-208ENST00000430547 AP3B1O00203 1094 aa17.13■□□□□ 0.33
NUP50-208ENST00000430547 LIN7AO14910 233 aaPredicted RBP17.13■□□□□ 0.33
NUP50-208ENST00000430547 GOT2P00505 430 aaKnown RBP17.13■□□□□ 0.33
NUP50-208ENST00000430547 WT1P19544 449 aaPredicted RBP17.13■□□□□ 0.33
NUP50-208ENST00000430547 PSMA3P25788 255 aa17.13■□□□□ 0.33
NUP50-208ENST00000430547 PREPP48147 710 aa17.13■□□□□ 0.33
NUP50-208ENST00000430547 CD151P48509 253 aa17.13■□□□□ 0.33
NUP50-208ENST00000430547 ABHD18Q0P651 414 aa17.13■□□□□ 0.33
NUP50-208ENST00000430547 TUBB3Q13509 450 aa17.13■□□□□ 0.33
NUP50-208ENST00000430547 FASTKD1Q53R41 847 aaKnown RBP17.13■□□□□ 0.33
NUP50-208ENST00000430547 XKR5Q6UX68 686 aa17.13■□□□□ 0.33
NUP50-208ENST00000430547 CERS6Q6ZMG9 384 aa17.13■□□□□ 0.33
NUP50-208ENST00000430547 OR4E2Q8NGC2 313 aa17.13■□□□□ 0.33
NUP50-208ENST00000430547 OR4L1Q8NH43 312 aa17.13■□□□□ 0.33
NUP50-208ENST00000430547 ELMO1Q92556 727 aa17.13■□□□□ 0.33
NUP50-208ENST00000430547 EXTL1Q92935 676 aa17.13■□□□□ 0.33
NUP50-208ENST00000430547 STAMBPL1Q96FJ0 436 aa17.13■□□□□ 0.33
NUP50-208ENST00000430547 MED8Q96G25 268 aa17.13■□□□□ 0.33
NUP50-208ENST00000430547 SLC41A2Q96JW4 573 aa17.13■□□□□ 0.33
NUP50-208ENST00000430547 SPRY4Q9C004 299 aa17.13■□□□□ 0.33
NUP50-208ENST00000430547 OR52A5Q9H2C5 316 aa17.13■□□□□ 0.33
NUP50-208ENST00000430547 SRMSQ9H3Y6 488 aa17.13■□□□□ 0.33
NUP50-208ENST00000430547 MVB12BQ9H7P6 319 aa17.13■□□□□ 0.33
NUP50-208ENST00000430547 SLC2A6Q9UGQ3 507 aa17.13■□□□□ 0.33
NUP50-208ENST00000430547 LNPEPQ9UIQ6 1025 aa17.13■□□□□ 0.33
NUP50-208ENST00000430547 RARRES3Q9UL19 164 aa17.13■□□□□ 0.33
NUP50-208ENST00000430547 GSAPA4D1B5 854 aa17.12■□□□□ 0.33
NUP50-208ENST00000430547 MATN2O00339 956 aa17.12■□□□□ 0.33
NUP50-208ENST00000430547 C1QL1O75973 258 aa17.12■□□□□ 0.33
NUP50-208ENST00000430547 DLGAP3O95886 979 aa17.12■□□□□ 0.33
NUP50-208ENST00000430547 FGF5P12034 268 aa17.12■□□□□ 0.33
NUP50-208ENST00000430547 POLR2CP19387 275 aaPredicted RBP17.12■□□□□ 0.33
NUP50-208ENST00000430547 KCNJ1P48048 391 aa17.12■□□□□ 0.33
NUP50-208ENST00000430547 SESN2P58004 480 aaPredicted RBP17.12■□□□□ 0.33
NUP50-208ENST00000430547 CYP4F2P78329 520 aa17.12■□□□□ 0.33
NUP50-208ENST00000430547 HSD11B2P80365 405 aa17.12■□□□□ 0.33
NUP50-208ENST00000430547 ACY1Q03154 408 aa17.12■□□□□ 0.33
NUP50-208ENST00000430547 BOP1Q14137 746 aaKnown RBP17.12■□□□□ 0.33
NUP50-208ENST00000430547 MAP7Q14244 749 aa17.12■□□□□ 0.33
NUP50-208ENST00000430547 AARS2Q5JTZ9 985 aaKnown RBP17.12■□□□□ 0.33
NUP50-208ENST00000430547 PCID2Q5JVF3 399 aa17.12■□□□□ 0.33
NUP50-208ENST00000430547 TMTC4Q5T4D3 741 aa17.12■□□□□ 0.33
NUP50-208ENST00000430547 C6orf15Q6UXA7 325 aaPredicted RBP17.12■□□□□ 0.33
NUP50-208ENST00000430547 TIPARPQ7Z3E1 657 aaKnown RBP17.12■□□□□ 0.33
NUP50-208ENST00000430547 CARFQ8N187 725 aa17.12■□□□□ 0.33
NUP50-208ENST00000430547 PEX13Q92968 403 aa17.12■□□□□ 0.33
NUP50-208ENST00000430547 TSSK1BQ9BXA7 367 aa17.12■□□□□ 0.33
NUP50-208ENST00000430547 SOHLH2Q9NX45 425 aa17.12■□□□□ 0.33
NUP50-208ENST00000430547 PIEZO2Q9H5I5 2752 aa17.12■□□□□ 0.33
NUP50-208ENST00000430547 COL6A6A6NMZ7 2263 aa17.12■□□□□ 0.33
NUP50-208ENST00000430547 FASNP49327 2511 aaKnown RBP17.11■□□□□ 0.33
NUP50-208ENST00000430547 LOC101059948A0A1B0GTJ6 334 aa17.11■□□□□ 0.33
NUP50-208ENST00000430547 KIAA0754O94854 1291 aa17.11■□□□□ 0.33
NUP50-208ENST00000430547 ZBTB11O95625 1053 aaPredicted RBP17.11■□□□□ 0.33
NUP50-208ENST00000430547 CDH3P22223 829 aa17.11■□□□□ 0.33
NUP50-208ENST00000430547 PDHA2P29803 388 aa17.11■□□□□ 0.33
NUP50-208ENST00000430547 ARCN1P48444 511 aaKnown RBP17.11■□□□□ 0.33
NUP50-208ENST00000430547 ACVR1Q04771 509 aa17.11■□□□□ 0.33
NUP50-208ENST00000430547 KCNAB1Q14722 419 aa17.11■□□□□ 0.33
NUP50-208ENST00000430547 BRD3Q15059 726 aa17.11■□□□□ 0.33
NUP50-208ENST00000430547 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.11■□□□□ 0.33
NUP50-208ENST00000430547 UNC5BQ8IZJ1 945 aa17.11■□□□□ 0.33
NUP50-208ENST00000430547 ZNF843Q8N446 348 aa17.11■□□□□ 0.33
NUP50-208ENST00000430547 GALNT6Q8NCL4 622 aa17.11■□□□□ 0.33
NUP50-208ENST00000430547 TFGQ92734 400 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms