RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 A0A1W2PRV1 198 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 ANXA2P2A6NMY6 339 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 HEPACAM2A8MVW5 462 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 AKR1B15C9JRZ8 316 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 M0QZ24 198 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 DDX39AO00148 427 aaKnown RBP2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 PSMA7O14818 248 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 KERAO60938 352 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 SIX3O95343 332 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 OLFM2O95897 454 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 EGFP01133 1207 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 INHBAP08476 426 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 FAM200BP0CF97 657 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 IGHV4-30-4P0DP06 118 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 EEF2P13639 858 aaKnown RBP2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 PLA2G2AP14555 144 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 PFKFB1P16118 471 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 LBPP18428 481 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 HRH2P25021 359 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 PSMA3P25788 255 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 ARSEP51690 589 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 RAD23BP54727 409 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 TUBA1BP68363 451 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 SIRPAP78324 504 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 IL1RL1Q01638 556 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 RBPJQ06330 500 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 TROAPQ12815 778 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 KIF5AQ12840 1032 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 NFATC4Q14934 902 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 EFNB3Q15768 340 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 CALCRLQ16602 461 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 SMU1Q2TAY7 513 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 ANKRD20A4Q4UJ75 823 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 ANKRD20A8PQ5CZ79 823 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 PAPPA-AS1Q5QFB9 102 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 ANKRD20A2Q5SQ80 823 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 ANKRD20A1Q5TYW2 823 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 ANKRD20A3Q5VUR7 823 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 ALS2CLQ60I27 953 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 KRT39Q6A163 491 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 TMEM270Q6UE05 265 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 TMEM182Q6ZP80 229 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 LINC00696Q6ZRV3 163 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 INTS8Q75QN2 995 aaKnown RBP2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 ADCK2Q7Z695 626 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 ABI3BPQ7Z7G0 1075 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 CCDC190Q86UF4 302 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 NRROSQ86YC3 692 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 UNC45BQ8IWX7 931 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 NHLRC2Q8NBF2 726 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 UXS1Q8NBZ7 420 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 TSPAN14Q8NG11 270 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 LILRB1Q8NHL6 650 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 TMED6Q8WW62 240 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 RND1Q92730 232 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 APBB2Q92870 758 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 SPSB1Q96BD6 273 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 MTBPQ96DY7 904 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 SPACA9Q96E40 222 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 ARSGQ96EG1 525 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 WBP1Q96G27 269 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 MUS81Q96NY9 551 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 OR1F2PQ96R84 312 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 PCYT2Q99447 389 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 C16orf70Q9BSU1 422 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 KRTAP4-3Q9BYR4 195 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 MID1IP1Q9NPA3 183 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 EQTNQ9NQ60 294 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 ADPRHL2Q9NX46 363 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 P4HTMQ9NXG6 502 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 CACNG4Q9UBN1 327 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 TINAGQ9UJW2 476 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 PCDHGB1Q9Y5G3 927 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 NOTCH4Q99466 2003 aa2.88□□□□□ -1.95
HMGB1P9-201ENST00000429856 IGLV5-37A0A075B6J1 123 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 A0A087WV48 116 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 A0A0A6YYC8 382 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 DENND3A2RUS2 1198 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 HTR3EA5X5Y0 456 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 TMEM189-UBE2V1I3L0A0 370 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 I3L1I5 382 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 PTGESO14684 152 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 WDR46O15213 610 aaKnown RBP2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 HSPA12AO43301 675 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 ZNF217O75362 1048 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 GH2P01242 217 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 LINGO3P0C6S8 592 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 VPREB1P12018 145 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 STMN1P16949 149 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 ZNF12P17014 697 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 DDX5P17844 614 aaKnown RBP2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 CASTP20810 708 aaKnown RBP2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 UBA1P22314 1058 aaKnown RBP2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 MPZP25189 248 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 ITGB8P26012 769 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 CD27P26842 260 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 HOXC9P31274 260 aa2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 APOBEC1P41238 236 aaKnown RBP2.87□□□□□ -1.95
HMGB1P9-201ENST00000429856 MATR3P43243 847 aaKnown RBP eCLIP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms