RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 TMC3Q7Z5M5 1100 aa11.13□□□□□ -0.63
DDX39B-209ENST00000428450 POLNQ7Z5Q5 900 aa11.13□□□□□ -0.63
DDX39B-209ENST00000428450 AMZ2Q86W34 360 aa11.13□□□□□ -0.63
DDX39B-209ENST00000428450 TRAPPC5Q8IUR0 188 aa11.13□□□□□ -0.63
DDX39B-209ENST00000428450 MAGEB10Q96LZ2 347 aaPredicted RBP11.13□□□□□ -0.63
DDX39B-209ENST00000428450 LMF1Q96S06 567 aa11.13□□□□□ -0.63
DDX39B-209ENST00000428450 LHPPQ9H008 270 aa11.13□□□□□ -0.63
DDX39B-209ENST00000428450 CXXC4Q9H2H0 198 aa11.13□□□□□ -0.63
DDX39B-209ENST00000428450 KIR3DX1Q9H7L2 352 aa11.13□□□□□ -0.63
DDX39B-209ENST00000428450 ZWILCHQ9H900 591 aa11.13□□□□□ -0.63
DDX39B-209ENST00000428450 ZFYVE1Q9HBF4 777 aa11.13□□□□□ -0.63
DDX39B-209ENST00000428450 IMP3Q9NV31 184 aaKnown RBP11.13□□□□□ -0.63
DDX39B-209ENST00000428450 IFT80Q9P2H3 777 aaPredicted RBP11.13□□□□□ -0.63
DDX39B-209ENST00000428450 GPN3Q9UHW5 284 aaPredicted RBP11.13□□□□□ -0.63
DDX39B-209ENST00000428450 NSD1Q96L73 2696 aaPredicted RBP11.13□□□□□ -0.63
DDX39B-209ENST00000428450 NUP210LQ5VU65 1888 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 CSPG4Q6UVK1 2322 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 POP7O75817 140 aaKnown RBP11.12□□□□□ -0.63
DDX39B-209ENST00000428450 WISP2O76076 250 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 ATXN8OSP0DMR3 200 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 PRKCSHP14314 528 aaPredicted RBP11.12□□□□□ -0.63
DDX39B-209ENST00000428450 DESP17661 470 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 KLK2P20151 261 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 MMP11P24347 488 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 PRDX3P30048 256 aaKnown RBP11.12□□□□□ -0.63
DDX39B-209ENST00000428450 SMSP52788 366 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 MFAP5Q13361 173 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 MAMLD1Q13495 774 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 NFE2L1Q14494 772 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 SLC9A5Q14940 896 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 METRNLQ641Q3 311 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 ISLR2Q6UXK2 745 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 LINC00696Q6ZRV3 163 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 MCOLN2Q8IZK6 566 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 OR4E2Q8NGC2 313 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 MAML1Q92585 1016 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 CSPG4P5Q96PW8 444 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 VPS35Q96QK1 796 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 TMEM121Q9BTD3 319 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 PITPNM3Q9BZ71 974 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 DLL4Q9NR61 685 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 SLC22A11Q9NSA0 550 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 NDOR1Q9UHB4 597 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 PCDHGB6Q9Y5F9 930 aa11.12□□□□□ -0.63
DDX39B-209ENST00000428450 AKAP6Q13023 2319 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 H3BRJ5 948 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 EPHB6O15197 1021 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 HCRTR1O43613 425 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 CTSBP07858 339 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 MMP2P08253 660 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 CA4P22748 312 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 IL1R2P27930 398 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 CTSCP53634 463 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 XRCC4Q13426 336 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 INAQ16352 499 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 DPYSL2Q16555 572 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 C3AR1Q16581 482 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 NKAIN1Q4KMZ8 207 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 ATP13A5Q4VNC0 1218 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 KIRREL2Q6UWL6 708 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 SPDYE1Q8NFV5 336 aaPredicted RBP11.11□□□□□ -0.63
DDX39B-209ENST00000428450 PROKR1Q8TCW9 393 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 MDFIQ99750 246 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 NDC1Q9BTX1 674 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 AP1M1Q9BXS5 423 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 TRIM7Q9C029 511 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 SPRTNQ9H040 489 aaPredicted RBP11.11□□□□□ -0.63
DDX39B-209ENST00000428450 KLHL25Q9H0H3 589 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 RBM22Q9NW64 420 aaKnown RBP eCLIP11.11□□□□□ -0.636e-11■■□□□ 13.8
DDX39B-209ENST00000428450 ABI3Q9P2A4 366 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 DHCR7Q9UBM7 475 aaKnown RBP11.11□□□□□ -0.63
DDX39B-209ENST00000428450 TNFRSF10DQ9UBN6 386 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 SEC14L3Q9UDX4 400 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 SHOC2Q9UQ13 582 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 RPH3AQ9Y2J0 694 aaPredicted RBP11.11□□□□□ -0.63
DDX39B-209ENST00000428450 HS3ST3B1Q9Y662 390 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 AP1M2Q9Y6Q5 423 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 COL6A5A8TX70 2615 aa11.11□□□□□ -0.63
DDX39B-209ENST00000428450 TMEM191CA6NGB0 347 aa11.1□□□□□ -0.63
DDX39B-209ENST00000428450 MATN3O15232 486 aa11.1□□□□□ -0.63
DDX39B-209ENST00000428450 FANCGO15287 622 aa11.1□□□□□ -0.63
DDX39B-209ENST00000428450 SLC19A2O60779 497 aa11.1□□□□□ -0.63
DDX39B-209ENST00000428450 HLA-DQB2P05538 268 aa11.1□□□□□ -0.63
DDX39B-209ENST00000428450 PIRTP0C851 137 aa11.1□□□□□ -0.63
DDX39B-209ENST00000428450 PVRP15151 417 aa11.1□□□□□ -0.63
DDX39B-209ENST00000428450 HLA-DPA1P20036 260 aa11.1□□□□□ -0.63
DDX39B-209ENST00000428450 DNAJA1P31689 397 aaKnown RBP11.1□□□□□ -0.63
DDX39B-209ENST00000428450 GABRA4P48169 554 aa11.1□□□□□ -0.63
DDX39B-209ENST00000428450 KLK7P49862 253 aa11.1□□□□□ -0.63
DDX39B-209ENST00000428450 TNFSF10P50591 281 aa11.1□□□□□ -0.63
DDX39B-209ENST00000428450 IST1P53990 364 aa11.1□□□□□ -0.63
DDX39B-209ENST00000428450 POLR2FP61218 127 aaKnown RBP11.1□□□□□ -0.63
DDX39B-209ENST00000428450 PRKAA1Q13131 559 aa11.1□□□□□ -0.63
DDX39B-209ENST00000428450 HSP90AA4PQ58FG1 418 aa11.1□□□□□ -0.63
DDX39B-209ENST00000428450 IRAK1BP1Q5VVH5 260 aa11.1□□□□□ -0.63
DDX39B-209ENST00000428450 MEX3BQ6ZN04 569 aaKnown RBP11.1□□□□□ -0.63
DDX39B-209ENST00000428450 LRRC49Q8IUZ0 686 aa11.1□□□□□ -0.63
DDX39B-209ENST00000428450 GPR135Q8IZ08 494 aa11.1□□□□□ -0.63
DDX39B-209ENST00000428450 RASGEF1AQ8N9B8 481 aa11.1□□□□□ -0.63
DDX39B-209ENST00000428450 TEKT4Q8WW24 435 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms