RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 PDE10AQ9Y233 779 aa14.9□□□□□ -0.02
ACTB-204ENST00000425660 IGLON5A6NGN9 336 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 DCXO43602 365 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 PLRG1O43660 514 aaKnown RBP14.89□□□□□ -0.03
ACTB-204ENST00000425660 VEGFDO43915 354 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 SKAP2O75563 359 aaPredicted RBP14.89□□□□□ -0.03
ACTB-204ENST00000425660 RNASEH2AO75792 299 aaKnown RBP14.89□□□□□ -0.03
ACTB-204ENST00000425660 KLF8O95600 359 aaPredicted RBP14.89□□□□□ -0.03
ACTB-204ENST00000425660 GUCA1CO95843 209 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 NQO1P15559 274 aaKnown RBP14.89□□□□□ -0.03
ACTB-204ENST00000425660 NCF2P19878 526 aaPredicted RBP14.89□□□□□ -0.03
ACTB-204ENST00000425660 TEAD1P28347 426 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 PKNOX1P55347 436 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 KCNJ2P63252 427 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 CDC16Q13042 620 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 PNCKQ6P2M8 343 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 TMEM220Q6QAJ8 160 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 UBE2R2Q712K3 238 aaPredicted RBP14.89□□□□□ -0.03
ACTB-204ENST00000425660 TMPRSS6Q8IU80 811 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 KIF2BQ8N4N8 673 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 C19orf60Q96EN9 201 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 HIC2Q96JB3 615 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 GUCD1Q96NT3 240 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 TMEM79Q9BSE2 394 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 CD244Q9BZW8 370 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 FBXL12Q9NXK8 326 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 STK38LQ9Y2H1 464 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 FIS1Q9Y3D6 152 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 C17orf113A0A1B0GUU1 675 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 H0YHG0 523 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 ENO1P06733 434 aaKnown RBP14.89□□□□□ -0.03
ACTB-204ENST00000425660 ANXA5P08758 320 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 COL9A1P20849 921 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 PRDX3P30048 256 aaKnown RBP14.89□□□□□ -0.03
ACTB-204ENST00000425660 MAPK9P45984 424 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 AP1S2P56377 157 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 WSCD2Q2TBF2 565 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 FBXO43Q4G163 708 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 IER5LQ5T953 404 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 LARP4Q71RC2 724 aaKnown RBP eCLIP14.89□□□□□ -0.031e-78■□□□□ 8.8
ACTB-204ENST00000425660 SYVN1Q86TM6 617 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 ZNF547Q8IVP9 402 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 SLC22A15Q8IZD6 547 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 PLA2G15Q8NCC3 412 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 TWIST2Q8WVJ9 160 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 TMEM159Q96B96 161 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 EGFL8Q99944 293 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 BTBD10Q9BSF8 475 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 NUSAP1Q9BXS6 441 aaKnown RBP14.89□□□□□ -0.03
ACTB-204ENST00000425660 OR2AG1Q9H205 316 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 ATXN10Q9UBB4 475 aa14.89□□□□□ -0.03
ACTB-204ENST00000425660 PSIP1O75475 530 aaKnown RBP14.88□□□□□ -0.03
ACTB-204ENST00000425660 PCDH8O95206 1070 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 DNTTP04053 509 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 UROSP10746 265 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 PRDX6P30041 224 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 HNMTP50135 292 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 RPS21P63220 83 aaKnown RBP14.88□□□□□ -0.03
ACTB-204ENST00000425660 GTF2H2Q13888 395 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 CCINQ13939 588 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 SMAD2Q15796 467 aaKnown RBP14.88□□□□□ -0.03
ACTB-204ENST00000425660 C18orf21Q32NC0 220 aaPredicted RBP14.88□□□□□ -0.03
ACTB-204ENST00000425660 MAP7D1Q3KQU3 841 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 TMEM259Q4ZIN3 620 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 GTF2H2CQ6P1K8 395 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 GPRIN3Q6ZVF9 776 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 GOLGA7Q7Z5G4 137 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 TRIM74Q86UV6 250 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 TCAIMQ8N3R3 496 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 OR52B6Q8NGF0 335 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 CMTM5Q96DZ9 223 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 KCNA7Q96RP8 456 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 TBC1D10AQ9BXI6 508 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 C1QTNF2Q9BXJ5 285 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 TRIM54Q9BYV2 358 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 C1orf21Q9H246 121 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 TUBB1Q9H4B7 451 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 ARL15Q9NXU5 204 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 TAS2R1Q9NYW7 299 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 FZD4Q9ULV1 537 aa14.88□□□□□ -0.03
ACTB-204ENST00000425660 ZFR2Q9UPR6 939 aaKnown RBP14.88□□□□□ -0.03
ACTB-204ENST00000425660 OR7A17O14581 309 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 GIPC1O14908 333 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 LIN7AO14910 233 aaPredicted RBP14.87□□□□□ -0.03
ACTB-204ENST00000425660 CHUKO15111 745 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 RASSF9O75901 435 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 OTCP00480 354 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 HIST1H2AGP0C0S8 130 aaPredicted RBP14.87□□□□□ -0.03
ACTB-204ENST00000425660 HIST1H2ADP20671 130 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 CYP2A7P20853 494 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 TRIM23P36406 574 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 HSPA7P48741 367 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 ADPRHP54922 357 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 CDK3Q00526 305 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 KLF10Q13118 480 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 NAA25Q14CX7 972 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 TMEM198Q66K66 360 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 KIAA1161Q6NSJ0 714 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 XKR5Q6UX68 686 aa14.87□□□□□ -0.03
ACTB-204ENST00000425660 EFL1Q7Z2Z2 1120 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms