RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 IL9RQ01113 521 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 GSTM4Q03013 218 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 SLC14A1Q13336 389 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 GTF2H3Q13889 308 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 LRP8Q14114 963 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 GBX1Q14549 363 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 UAP1Q16222 522 aaPredicted RBP6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 STPG1Q5TH74 334 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 METRNLQ641Q3 311 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 LVRNQ6Q4G3 990 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 CRTC3Q6UUV7 619 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 WASH2PQ6VEQ5 465 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 SLCO4C1Q6ZQN7 724 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 FAM83HQ6ZRV2 1179 aaPredicted RBP6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 STRA8Q7Z7C7 330 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 PIP4P1Q86T03 277 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 AMZ2Q86W34 360 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 ZC3HC1Q86WB0 502 aaKnown RBP6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 C17orf82Q86X59 251 aaPredicted RBP6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 GATAD2AQ86YP4 633 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 TRAPPC5Q8IUR0 188 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 ALDH16A1Q8IZ83 802 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 LILRA3Q8N6C8 439 aaPredicted RBP6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 LKAAEAR1Q8TD35 194 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 LMX1AQ8TE12 382 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 CAVIN3Q969G5 261 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 CCM2Q9BSQ5 444 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 AARSD1Q9BTE6 412 aaKnown RBP6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 ACSS3Q9H6R3 686 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 VPS37BQ9H9H4 285 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 PPANQ9NQ55 473 aaKnown RBP6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 WASH6PQ9NQA3 447 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 KLC4Q9NSK0 619 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 SPATS2LQ9NUQ6 558 aaKnown RBP6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 NSMCE4AQ9NXX6 385 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 ZFATQ9P243 1243 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 GALPQ9UBC7 116 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 TBC1D29Q9UFV1 150 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 CDYLQ9Y232 598 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 BTBD3Q9Y2F9 522 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 PCDHB1Q9Y5F3 818 aa6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 RIF1Q5UIP0 2472 aaKnown RBP6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 TP53BP1Q12888 1972 aaPredicted RBP6.93□□□□□ -1.3
CHCHD3P1-201ENST00000425516 CABIN1Q9Y6J0 2220 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 LY6G6EA0A0G2JKS1 128 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 UBA6A0AVT1 1052 aaPredicted RBP6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 HMX2A2RU54 273 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 NEMP2A6NFY4 417 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 C4orf47A7E2U8 309 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 H3BMM5 538 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 QSOX1O00391 747 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 PFDN6O15212 129 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 NOBOXO60393 691 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 CBFA2T3O75081 653 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 NIPSNAP2O75323 286 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 GPC4O75487 556 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 FAM155BO75949 473 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 ACSL3O95573 720 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 FTH1P02794 183 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 EPXP11678 715 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 ACP5P13686 325 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 BRAFP15056 766 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 MCM3P25205 808 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 GCAP28676 217 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 GRNP28799 593 aaKnown RBP6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 STX2P32856 288 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 PHBP35232 272 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 PLA2G5P39877 138 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 GRK6P43250 576 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 ABCG1P45844 678 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 CD151P48509 253 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 CSRP3P50461 194 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 CLCN7P51798 805 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 ATXN3P54252 364 aaPredicted RBP6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 CSE1LP55060 971 aaKnown RBP6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 CDKN2DP55273 166 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 ILF3Q12906 894 aaKnown RBP eCLIP6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 NAB1Q13506 487 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 NFE2L1Q14494 772 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 SLC29A2Q14542 456 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 EFTUD2Q15029 972 aaKnown RBP eCLIP6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 ELOCQ15369 112 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 TCEA2Q15560 299 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 AASDHQ4L235 1098 aaPredicted RBP6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 RBM20Q5T481 1227 aaKnown RBP6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 AGAP9Q5VTM2 703 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 CAPRIN2Q6IMN6 1127 aaKnown RBP6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 EMBQ6PCB8 327 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 SLC30A9Q6PML9 568 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 ABRAXAS1Q6UWZ7 409 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 TAF8Q7Z7C8 310 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 GKN2Q86XP6 184 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 SFTPA2Q8IWL1 248 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 CFAP206Q8IYR0 622 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 KIAA2013Q8IYS2 634 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 NAGSQ8N159 534 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 KRT222Q8N1A0 295 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 MREGQ8N565 214 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 OTUD6BQ8N6M0 293 aa6.92□□□□□ -1.3
CHCHD3P1-201ENST00000425516 FAM181AQ8N9Y4 354 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms